PGML0743, PGML0743 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0743
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATGAG)3
Primer 1PGML0743_F: GGACATGAACGGCTTTGACT
Primer 2PGML0743_R: GTGTCCCACACCTCACACAG
Product Length329
Publication[view all]
CommentBAC_ID=FITB7040.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D12chromosomeD12:56793332..56793666 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018226.1chromosomeCM018226.1:53409016..53409350 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_12chromosomeD5_12:6325087..6325414 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_12chromosomeD5_12:6286932..6287258 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_12chromosomeD10_12:48455083..48455416 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr8chromosomeDt_chr8:48567044..48567378 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D12chromosomeD12:53298670..53299004 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D12chromosomeGhir_D12:55719012..55719346 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D12chromosomeD12:55036696..55037030 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D12chromosomeD12:55809326..55809660 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D12chromosomeD12:53989518..53989852 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D12chromosomeGbar_D12:52419406..52419740 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D12chromosomeD12:54211983..54212317 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017634.1chromosomeCM017634.1:54108699..54109033 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017660.1chromosomeCM017660.1:56969325..56969659 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017712.1chromosomeCM017712.1:54729003..54729337 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D12chromosomeD12:56174350..56174684 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr12chromosomeChr12:51452824..51453152 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr08chromosomeChr08:51736892..51737231 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr08chromosomechr08:39975144..39975472 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr08chromosomeChr08:53353087..53353421 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0743 ID=PGML0743; Name=PGML0743; organism=Gossypium raimondii; type=genetic_marker; length=329bp
GGACATGAACGGCTTTGACTCATTTGACGTGGGTAGACAGTCATTTCACA
AATTTCATTTTCCTTGGCAAAAGTAAAACTGTTGTAGATATTTTTAGCTA
CGAAAAAAGATTGTTGATGAGATGAGATGAGGGGCATGGGGGAAGCTTGG
TGGTTATTGGTTTCAGTTCGGATAATGTGATGCCACGTGGCATGAAAAGG
GTGGCTGGTAAAAGACGAGGGGTTTGGGGTGTAGAGTGGTGGAGGTTACA
TGGTGACTGTGCACCATGCAATGCATTAGCCATTCCCAAATTCATTCTTT
GGACGGTTCCTGTGTGAGGTGTGGGACAC