PGML0742, PGML0742 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0742
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATATT)2,(TA)14
Primer 1PGML0742_F: AGCTGAGGCGGTTTAACCTT
Primer 2PGML0742_R: TGAACCGTCGCTCTCTTTCT
Product Length216
Publication[view all]
CommentBAC_ID=FITB7144.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:24160077..24160306 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
D5_09chromosomeD5_09:2203120..2203357 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_08chromosomeD5_08:54190916..54191145 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_08chromosomeD5_08:48796056..48796258 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_12chromosomeD5_12:13553120..13553333 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_06chromosomeD5_06:50691438..50691667 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_08chromosomeD10_08:17154429..17154675 +Gossypium turneri (D10) genome NSF_v1_a2n/a
D10_05chromosomeD10_05:35309043..35309312 -Gossypium turneri (D10) genome NSF_v1_a2n/a
D10chromosomeD10:22913191..22913420 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:23017696..23017924 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:23177961..23178190 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:23152101..23152330 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
D10chromosomeD10:23304600..23304829 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr12chromosomeChr12:44228174..44228388 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr10chromosomeChr10:22428569..22428803 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr08chromosomeChr08:55076471..55076702 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr08chromosomeChr08:49707952..49708154 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr08chromosomeChr08:49481387..49481675 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr03chromosomeChr03:7956271..7956493 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0742 ID=PGML0742; Name=PGML0742; organism=Gossypium raimondii; type=genetic_marker; length=216bp
AGCTGAGGCGGTTTAACCTTAAAAATCTAAGATATTTTTTTAATTTAAAA
TATATATTATATTATATATACGTAAGTAATGATTATGTTTTTATATTATA
TTATATTATATATATATATATATCAAAAGAAAGAATAGAAATGAAAAAGA
AAGAAACAGAGAGCAAAACGAAACAGAGAAGGGAGAAAGAAGAAAAAGAA
AGAGAGCGACGGTTCA