PGML0736, PGML0736 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0736
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TGGAA)3
Primer 1PGML0736_F: AGCTCTAGGCCTTACGGAGG
Primer 2PGML0736_R: AGCCATGATCTTTCCTATTTACTC
Product Length101
Publication[view all]
CommentBAC_ID=FITB6926.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
scaffold_3693supercontigscaffold_3693:4882..4981 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018225.1chromosomeCM018225.1:39814794..39814893 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_11chromosomeD5_11:28857802..28857902 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_11chromosomeD10_11:37516387..37516487 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr2chromosomeDt_chr2:32224666..32224765 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D11chromosomeD11:40936554..40936653 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D11chromosomeGhir_D11:41197992..41198091 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D11chromosomeD11:40260073..40260172 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D11chromosomeD11:41266305..41266404 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
Gbar_D11chromosomeGbar_D11:40096314..40096413 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D11chromosomeD11:39934211..39934310 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017633.1chromosomeCM017633.1:40594883..40594982 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017659.1chromosomeCM017659.1:41686331..41686430 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017711.1chromosomeCM017711.1:39848946..39849045 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D11chromosomeD11:41574648..41574747 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr11chromosomeChr11:26841323..26841423 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr07chromosomeChr07:38499649..38499749 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr07chromosomechr07:30953332..30953432 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_07chromosomeChr_07:29574032..29574132 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr07chromosomeChr07:38495804..38495906 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr07chromosomeChr07:28013121..28013220 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0736 ID=PGML0736; Name=PGML0736; organism=Gossypium raimondii; type=genetic_marker; length=101bp
AGCTCTAGGCCTTACGGAGGGGACATTGCTCGAGCATTAAGGTATAGGAT
GGTGAAATGGATGGAATGGAATGGAAAGAGTAAATAGGAAAGATCATGGC
T