PGML0721, PGML0721 (genetic_marker) Gossypium raimondii

Marker Overview


Name	PGML0721
Genbank ID	N/A
Type	SSR
Species	Gossypium raimondii
Repeat Motif	(AT)8
Primer 1	PGML0721_F: TCCATACTTGTGGGTGCAAA
Primer 2	PGML0721_R: CAATCTCCCGAATATTCAAAGC
Product Length	143
Publication	[view all]
Comment	BAC_ID=FITB7249.y1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
D5_09	chromosome	D5_09:29443167..29443305 +	Gossypium raimondii (D5) 'D5-4' genome NSF_v1	n/a
CM016622.1	chromosome	CM016622.1:22639922..22640066 -	Gossypium australe (G2) genome CRI_v1.1	n/a
Chr09	chromosome	Chr09:66083745..66083883 +	Gossypium herbaceum (A1) 'Mutema' genome WHU_v1	n/a
B_09	chromosome	B_09:53332734..53332874 +	Gossypium anomalum (B1) genome NSF_v1	n/a
Chr06	chromosome	Chr06:35928507..35928645 +	Gossypium thurberi (D1-5) genome CRI_v1	n/a
chr06_6502102	chromosome	chr06_6502102:5740..5878 +	Gossypium armourianum (D2-1) genome ISU_v1	n/a
Chr06	chromosome	Chr06:37538423..37538577 +	Gossypium davidsonii (D3d-8) genome CRI_v1	n/a

Publications


Year	Publication
2015	Tang S, Teng Z, Zhai T, Fang X, Liu F, Liu D, Zhang J, Liu D, Wang S, Zhang K, Shao Q. Construction of genetic map and QTL analysis of fiber quality traits for Upland cotton (Gossypium hirsutum L.). Euphytica. 2015 Jan 1;201(2):195-213.

Sequence

>PGML0721 ID=PGML0721; Name=PGML0721; organism=Gossypium raimondii; type=genetic_marker; length=143bp
TCCATACTTGTGGGTGCAAATTTATCGAACATTGCCTTTTGGTTATCTAT
TTTTAGCTTTTTAAATCATTAAAAGTGCGTATATATATATATATATTAAA
GTAATTGGTATGAGCTCATAAGCTTTGAATATTCGGGAGATTG

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PGML0721, PGML0721 (genetic_marker) Gossypium raimondii