PGML0713, PGML0713 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0713
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAAAG)3
Primer 1PGML0713_F: AACATCAACCTGGATTTCTCG
Primer 2PGML0713_R: TCGATTCATTTCAGGTCCAA
Product Length192
Publication[view all]
CommentBAC_ID=FITB9767.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D04chromosomeD04:45090659..45090850 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018218.1chromosomeCM018218.1:43322241..43322432 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_04chromosomeD5_04:10667915..10668106 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_04chromosomeD10_04:42197050..42197241 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr12chromosomeDt_chr12:9045883..9046074 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D04chromosomeD04:40111257..40111448 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D04chromosomeGhir_D04:45053965..45054156 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D04chromosomeD04:46060561..46060752 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D04chromosomeD04:44952483..44952674 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D04chromosomeD04:42892267..42892458 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
D04chromosomeD04:42933847..42934036 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D04chromosomeGbar_D04:41432837..41433028 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D04chromosomeD04:46538150..46538341 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017626.1chromosomeCM017626.1:43641111..43641302 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017652.1chromosomeCM017652.1:46128521..46128712 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017704.1chromosomeCM017704.1:43598652..43598843 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D04chromosomeD04:46730474..46730665 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:10623960..10624151 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr12chromosomeChr12:43152301..43152489 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr12chromosomechr12:20746704..20746895 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_12chromosomeChr_12:16674041..16674232 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr12chromosomeChr12:42846833..42847024 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr12chromosomeChr12:19378230..19378421 -Gossypium aridum (D4) genome ISU_v1n/a
Sequence
>PGML0713 ID=PGML0713; Name=PGML0713; organism=Gossypium raimondii; type=genetic_marker; length=192bp
AACATCAACCTGGATTTCTCGAAAAAGAAAAGAAAAGACGAAGTTGTCGA
CTAATAGCTTGGAGTTTACGGTTTGTGTTTCTATAATCTATACTATTGTA
AATTGCTACATTATGACTTGTTTTGCATGGTAAGATCATAAGGTATGCAA
TTATTGTTAAAAATAAATCAAATTGGACCTGAAATGAATCGA