PGML0705, PGML0705 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0705
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)25
Primer 1PGML0705_F: TATTGCCCTGGTCTTTACGC
Primer 2PGML0705_R: AAGGCAAATAACCCAAACCC
Product Length316
Publication[view all]
CommentBAC_ID=FITB9749.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D03chromosomeD03:39001212..39001527 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018217.1chromosomeCM018217.1:39567985..39568305 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D10_02chromosomeD10_02:38043914..38044218 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr3chromosomeDt_chr3:12511162..12511477 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D03chromosomeD03:33004278..33004593 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D03chromosomeGhir_D03:38996977..38997292 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D03chromosomeD03:40521768..40522083 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D03chromosomeD03:39938096..39938411 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D03chromosomeD03:39360164..39360479 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D03chromosomeGbar_D03:37984391..37984711 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D03chromosomeD03:40538919..40539239 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017625.1chromosomeCM017625.1:38939474..38939790 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017651.1chromosomeCM017651.1:42896935..42897251 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017703.1chromosomeCM017703.1:40494967..40495285 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D03chromosomeD03:41027368..41027683 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:35536894..35537209 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr03chromosomeChr03:37040782..37041096 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_03chromosomeChr_03:20410852..20411158 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr03chromosomeChr03:38865320..38865636 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr03chromosomeChr03:20832591..20832910 -Gossypium aridum (D4) genome ISU_v1n/a
Chr03chromosomeChr03:17796726..17797051 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr03chromosomeChr03:22206647..22206967 -Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0705 ID=PGML0705; Name=PGML0705; organism=Gossypium raimondii; type=genetic_marker; length=316bp
TATTGCCCTGGTCTTTACGCTTTTGGCCCTTTTCAATTTCATCTTATTCT
TTTTTTTACATTTTTACCCCATAATTTTAATTTCCTTGCATGTCAGTCCT
TTGACCCACTATTGAACCAAGGAAACAATGTGGGTTGGGATAATTTCCCT
TTGAGGCCCTATACTTTTCCATTTTATTTTAATTCAGTCCTTTATATTCT
TTTTTTGTTTTTTTTTTTGTTTTTTTATGATTTAAATTTTGTTACATATT
CAATTCAATCCCCAGACTATCGACCCTTTGGGGAATGATGTGTACTGGGT
TTGGGTTATTTGCCTT