PGML0668, PGML0668 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0668
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(GCT)5,(ATA)5
Primer 1PGML0668_F: ATCGCATCAAAGGTGAAACC
Primer 2PGML0668_R: TTTGAAAGTAAATGCACGACAA
Product Length168
Publication[view all]
CommentBAC_ID=FITB10572.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D01chromosomeD01:63238343..63238512 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018215.1chromosomeCM018215.1:61608337..61608502 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_01chromosomeD5_01:55490515..55490680 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_01chromosomeD10_01:1099522..1099745 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr9chromosomeDt_chr9:50324934..50325103 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D01chromosomeD01:60326160..60326329 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D01chromosomeGhir_D01:62038501..62038670 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D01chromosomeD01:63484648..63484817 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D01chromosomeD01:63470404..63470573 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D01chromosomeD01:59938027..59938196 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D01chromosomeGbar_D01:61778210..61778375 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D01chromosomeD01:62462731..62462896 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017623.1chromosomeCM017623.1:62804865..62805034 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017649.1chromosomeCM017649.1:64305951..64306116 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017701.1chromosomeCM017701.1:62261919..62262084 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D01chromosomeD01:63950926..63951095 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:51277823..51277990 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr02chromosomeChr02:60220944..60221168 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr02chromosomechr02:46340613..46340925 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_02chromosomeChr_02:40942263..40942444 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr02chromosomeChr02:61121678..61121877 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr02chromosomeChr02:44847185..44847385 -Gossypium aridum (D4) genome ISU_v1n/a
Chr02chromosomeChr02:43222813..43223016 -Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0668 ID=PGML0668; Name=PGML0668; organism=Gossypium raimondii; type=genetic_marker; length=168bp
ATCGCATCAAAGGTGAAACCAAGGAAGAAAAAATTTCCAGTCAACTTGGA
TTAAAAAAGCTGCTGCTGCTGCTAATTTCATAATAATAATAATAGAAATT
TCTGGAGAAAAATAAGAAAAAGTCAATTGTGGTAATGATCTCAAAATTGT
CGTGCATTTACTTTCAAA