PGML0667, PGML0667 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0667
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATTTT)4
Primer 1PGML0667_F: TAGCTTTGCATGGATGTGGA
Primer 2PGML0667_R: GGTTTCACCTTTGATGCGAT
Product Length181
Publication[view all]
CommentBAC_ID=FITB10572.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D01chromosomeD01:63238493..63238673 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018215.1chromosomeCM018215.1:61608483..61608663 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_01chromosomeD5_01:55490661..55490841 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Chr02_CRI-A2_v1.0.a1chromosomeChr02_CRI-A2_v1.0.a1:98100868..98101043 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
D10_01chromosomeD10_01:1099361..1099541 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr9chromosomeDt_chr9:50324773..50324953 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D01chromosomeD01:60326310..60326490 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D01chromosomeGhir_D01:62038651..62038831 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A01chromosomeGhir_A01:116392463..116392639 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D01chromosomeD01:63484798..63484978 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D01chromosomeD01:63470554..63470734 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D01chromosomeD01:59938177..59938357 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D01chromosomeGbar_D01:61778356..61778536 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A01chromosomeGbar_A01:114284225..114284400 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D01chromosomeD01:62462877..62463057 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017623.1chromosomeCM017623.1:62805015..62805195 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017649.1chromosomeCM017649.1:64306097..64306277 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017636.1chromosomeCM017636.1:120388263..120388438 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017701.1chromosomeCM017701.1:62262065..62262245 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D01chromosomeD01:63951076..63951256 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:1317719..1317894 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr01chromosomeChr01:51277971..51278151 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_01chromosomeB_01:96820861..96821035 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr02chromosomeChr02:60221149..60221324 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_02chromosomeChr_02:40942425..40942610 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr02chromosomeChr02:61121858..61122033 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr02chromosomeChr02:44847366..44847528 -Gossypium aridum (D4) genome ISU_v1n/a
E01chromosomeE01:115586379..115586556 -Gossypium stocksii (E1) genome NSF_v1n/a
Sequence
>PGML0667 ID=PGML0667; Name=PGML0667; organism=Gossypium raimondii; type=genetic_marker; length=181bp
TAGCTTTGCATGGATGTGGATTTAAGATGATTTATTTATATTATAAGGTT
TAATAATTATTCAATATTTTATTTTATTTTATTTTAGTCCTTTTGGTAGT
AGCCGCTAAACCAGCTTTCAATATGATAAGAAGAGAAAACGATGGATTAA
ATATACAAAATATCGCATCAAAGGTGAAACC