PGML0666, PGML0666 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0666
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAT)5
Primer 1PGML0666_F: GGGTCTCACTCCAAAGTCCA
Primer 2PGML0666_R: ACCGAACCCATTTCGATAAA
Product Length308
Publication[view all]
CommentBAC_ID=FITB10531.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D01chromosomeD01:15000917..15001223 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018215.1chromosomeCM018215.1:14774847..14775150 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_01chromosomeD5_01:14181842..14182148 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr2chromosomeDt_chr2:42601984..42602290 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D01chromosomeD01:13862991..13863297 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D01chromosomeGhir_D01:15284338..15284644 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D01chromosomeD01:14955948..14956254 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D01chromosomeD01:14810575..14810881 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D01chromosomeD01:15177608..15177914 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D01chromosomeGbar_D01:15373209..15373512 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D01chromosomeD01:15150088..15150397 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017623.1chromosomeCM017623.1:15041383..15041689 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017649.1chromosomeCM017649.1:15826034..15826332 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017701.1chromosomeCM017701.1:15164201..15164502 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D01chromosomeD01:15528944..15529250 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:14064798..14065104 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr02chromosomeChr02:14833072..14833364 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0666 ID=PGML0666; Name=PGML0666; organism=Gossypium raimondii; type=genetic_marker; length=308bp
GGGTCTCACTCCAAAGTCCAATCACAATGTCATGTGTAGTCTGCTCTGCT
CTGCGTTGCATTGGGGCTGCTCTAGTTTGACTACACCAAACCAAGTGCAC
ATTTGCATCTGTGTTACGTACATTATTGTAATATAAATATATATAAATGA
AAATGCTATCTCCTTTTCTTTTATTGGGTTCATATGAACGCAATCACATT
CACTCTTTTGAATAATAATAATAATGGCATAGGTCATGCAGTCAAAGAAT
AGGGCAAAATAACATTAAAGGCCCATTTTTTTTTTAAATTTATCGAAATG
GGTTCGGT