PGML0657, PGML0657 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0657
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TA)23,(GA)11
Primer 1PGML0657_F: AACGAATCTCCAACACCTTCA
Primer 2PGML0657_R: TTTGTACAACCCAAGTGTCATGT
Product Length253
Publication[view all]
CommentBAC_ID=FITB10497.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D08chromosomeD08:64220327..64220555 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018222.1chromosomeCM018222.1:60428743..60428971 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_08chromosomeD5_08:56631813..56632077 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_08chromosomeD5_08:56620068..56620309 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
scaffold862.1supercontigscaffold862.1:475060..475288 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D08chromosomeD08:60958773..60959001 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D08chromosomeGhir_D08:63418491..63418719 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D08chromosomeD08:63845299..63845527 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D08chromosomeD08:60547299..60547527 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D08chromosomeGbar_D08:60547481..60547709 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D08chromosomeD08:62413237..62413465 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017630.1chromosomeCM017630.1:62133799..62134025 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017656.1chromosomeCM017656.1:64311026..64311258 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017708.1chromosomeCM017708.1:60834755..60834979 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D08chromosomeD08:64040334..64040562 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:57543412..57543674 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr08chromosomeChr08:57531658..57531900 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Sequence
>PGML0657 ID=PGML0657; Name=PGML0657; organism=Gossypium raimondii; type=genetic_marker; length=253bp
AACGAATCTCCAACACCTTCACATTAATGATATATATATATATATATATA
TATATATATATATATATATATATATAGTCTTTGAATGGTTAATGGATTGA
AACTTTACTCTTTAATATATTAGAAAATGAAGATTATGTGAAATAAAAAT
GAAAAATTACATTTTAAAGATTATACCTCATAGTCATATATATGTGTCTG
TGAGAGAGAGAGAGAGAGAGAGAAAGTGTGACATGACACTTGGGTTGTAC
AAA