PGML0654, PGML0654 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0654
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AT)10
Primer 1PGML0654_F: TCCTTATGAACCCTGCACCT
Primer 2PGML0654_R: CTCCCTCTATTGGGCTCTCG
Product Length160
Publication[view all]
CommentBAC_ID=FITB2280.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D13chromosomeD13:9319952..9320102 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
D5_03chromosomeD5_03:7283596..7283756 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_06chromosomeD5_06:23985134..23985297 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr13chromosomeDt_chr13:51963873..51964023 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D13chromosomeD13:8949604..8949754 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D13chromosomeGhir_D13:8943709..8943859 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D13chromosomeD13:8713303..8713453 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D13chromosomeD13:9167111..9167261 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D13chromosomeD13:8837286..8837436 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D13chromosomeGbar_D13:8531245..8531395 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
CM017661.1chromosomeCM017661.1:9249974..9250124 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017713.1chromosomeCM017713.1:8761515..8761665 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D13chromosomeD13:9335667..9335817 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:8457757..8457914 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr06chromosomeChr06:23809675..23809832 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr03chromosomeChr03:55809416..55809576 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr09chromosomeChr09:3609569..3609719 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0654 ID=PGML0654; Name=PGML0654; organism=Gossypium raimondii; type=genetic_marker; length=160bp
TCCTTATGAACCCTGCACCTAATTCAGAAATAAAAAAAATTAAAATCTAT
ATATATATATATATATATTTAAGATTCTGCGAAAAAATTCCCTATATTCT
GATTTAATCCCAGTAGGTTCCTAATAAATGTTTTGGGCTTCGAGAGCCCA
ATAGAGGGAG