PGML0632, PGML0632 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0632
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TAAAA)5
Primer 1PGML0632_F: CTCACTGAGTTGGTGACCCAT
Primer 2PGML0632_R: TGCATATGGTGGGATTTGAA
Product Length209
Publication[view all]
CommentBAC_ID=FITB6264.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D09chromosomeD09:30270712..30270920 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018223.1chromosomeCM018223.1:28783528..28783741 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_09chromosomeD5_09:23566055..23566263 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_09chromosomeD10_09:20358917..20359126 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr6chromosomeDt_chr6:20187340..20187548 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D09chromosomeD09:29052818..29053026 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D09chromosomeGhir_D09:30779863..30780071 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D09chromosomeD09:30683883..30684091 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D09chromosomeD09:30396647..30396826 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D09chromosomeD09:28790257..28790465 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D09chromosomeGbar_D09:29335964..29336177 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D09chromosomeD09:32122764..32122977 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017631.1chromosomeCM017631.1:29632702..29632910 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017657.1chromosomeCM017657.1:30786267..30786475 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017709.1chromosomeCM017709.1:30260289..30260497 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D09chromosomeD09:31908508..31908716 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr09chromosomeChr09:29031519..29031727 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr06chromosomeChr06:29134203..29134410 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_06chromosomeChr_06:20210186..20210395 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr06chromosomeChr06:30769922..30770134 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr06chromosomeChr06:21835864..21836072 -Gossypium aridum (D4) genome ISU_v1n/a
Chr06chromosomeChr06:19764048..19764256 -Gossypium lobatum (D7) genome ISU_v1n/a
E09chromosomeE09:30374548..30374753 +Gossypium stocksii (E1) genome NSF_v1n/a
Sequence
>PGML0632 ID=PGML0632; Name=PGML0632; organism=Gossypium raimondii; type=genetic_marker; length=209bp
CTCACTGAGTTGGTGACCCATTGATGGCACCTCAACTAGTCACCAACTTA
GTCAGGAACTTAAGGAATAGTATAGATATACAACTGAAGGTAATAAAGTG
TGCCAATAAAAATAAAATATATAAAATAAAATAAAATAAAACTTTAGTTG
AATGGTAAATTATTTTTTTACTAATGCAATTTATGTGGCTTCAAATCCCA
CCATATGCA