PGML0629, PGML0629 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0629
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(GAA)7
Primer 1PGML0629_F: AATTCCGCGATACAAATTGC
Primer 2PGML0629_R: AAACATGGCAGACATGGTAGG
Product Length212
Publication[view all]
CommentBAC_ID=FITB6423.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D06chromosomeD06:13955261..13955469 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018220.1chromosomeCM018220.1:12934161..12934369 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_06chromosomeD5_06:12854564..12854775 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_06chromosomeD10_06:48637783..48637990 +Gossypium turneri (D10) genome NSF_v1_a2n/a
scaffold1213.1supercontigscaffold1213.1:55180..55388 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
Dt_chr10chromosomeDt_chr10:17722774..17722982 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D06chromosomeD06:13134136..13134344 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D06chromosomeGhir_D06:13691411..13691619 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D06chromosomeD06:13281309..13281517 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D06chromosomeD06:13675966..13676174 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D06chromosomeD06:13192332..13192540 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D06chromosomeGbar_D06:13086409..13086617 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D06chromosomeD06:12856307..12856515 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017628.1chromosomeCM017628.1:13569660..13569868 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017654.1chromosomeCM017654.1:13264105..13264316 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017706.1chromosomeCM017706.1:13138095..13138303 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D06chromosomeD06:13858915..13859123 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:12633665..12633876 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr10chromosomeChr10:13280983..13281197 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr10chromosomechr10:11381961..11382885 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_10chromosomeChr_10:10855882..10856084 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr10chromosomeChr10:9326273..9326472 -Gossypium aridum (D4) genome ISU_v1n/a
Chr10chromosomeChr10:8106527..8106726 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr10chromosomeChr10:9820791..9820999 -Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0629 ID=PGML0629; Name=PGML0629; organism=Gossypium raimondii; type=genetic_marker; length=212bp
AATTCCGCGATACAAATTGCGTTACTAAAGATTGCATTAATTTAAATTTC
AATAACTTAAATGTTTATTCTTTTTTCAAGAAAATGTGGAAGAAGAAGAA
GAAGAAGAAAGTTGATTGTATATTCATAATTGGGAAAATGGGAAAGTGTT
GAATTGTTGTATACTAGATTGATGGGAACATCCTTGTACTACCTACCATG
TCTGCCATGTTT