PGML0628, PGML0628 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0628
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TAGAGG)3
Primer 1PGML0628_F: GGCAAGATGCAGGTTTGACT
Primer 2PGML0628_R: TCAAACTTTGCACTTAAAGACATT
Product Length109
Publication[view all]
CommentBAC_ID=FITB6359.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D04chromosomeD04:34596421..34596523 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018218.1chromosomeCM018218.1:33007241..33007343 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_04chromosomeD5_04:20812028..20812136 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_04chromosomeD10_04:32101525..32101627 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr12chromosomeDt_chr12:12754222..12754324 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D04chromosomeD04:29950645..29950747 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D04chromosomeGhir_D04:34851836..34851938 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D04chromosomeD04:36027361..36027463 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D04chromosomeD04:34965034..34965136 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D04chromosomeD04:32608664..32608766 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D04chromosomeGbar_D04:31190832..31190934 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D04chromosomeD04:36385729..36385831 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017626.1chromosomeCM017626.1:33643697..33643799 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017652.1chromosomeCM017652.1:36121171..36121273 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017704.1chromosomeCM017704.1:33510158..33510260 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D04chromosomeD04:36416516..36416618 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:20784572..20784680 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr12chromosomeChr12:33281103..33281205 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_09chromosomeChr_09:44528572..44528674 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr09chromosomeChr09:41937514..41937616 +Gossypium aridum (D4) genome ISU_v1n/a
Chr09chromosomeChr09:44134792..44134906 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0628 ID=PGML0628; Name=PGML0628; organism=Gossypium raimondii; type=genetic_marker; length=109bp
GGCAAGATGCAGGTTTGACTCGTGAGGTAGAGGTAGAGGTAGAGGGAGAA
AATCTATGACAAATAATCCTGTTTTAATATAATTTAATGTCTTTAAGTGC
AAAGTTTGA