PGML0569, PGML0569 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0569
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TAAA)4
Primer 1PGML0569_F: CACAAGCTTATTGCCAACCA
Primer 2PGML0569_R: GCAGTAAATGCCACGACAAA
Product Length145
Publication[view all]
CommentBAC_ID=FITB10394.y2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_685supercontigscaffold_685:41233..41385 +
A10chromosomeA10:4640752..4640905 +
scaffold_685supercontigscaffold_685:19930..20077 -
D10chromosomeD10:4761110..4761257 -
D10chromosomeD10:4726421..4726567 -
CM018224.1chromosomeCM018224.1:4453978..4454122 -
CM018211.1chromosomeCM018211.1:4914796..4914950 -
D5_10chromosomeD5_10:58050138..58050282 +
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:124497682..124497835 +
D10_10chromosomeD10_10:59735239..59735382 +
CM016623.1chromosomeCM016623.1:6455639..6455783 -
At_chr11chromosomeAt_chr11:63520947..63521100 +
Dt_chr11chromosomeDt_chr11:1096374..1096521 -
scaffold2450_A10supercontigscaffold2450_A10:21061..21214 -
D10chromosomeD10:4572070..4572217 -
Ghir_D10chromosomeGhir_D10:4906232..4906378 -
Ghir_A10chromosomeGhir_A10:4740700..4740853 -
D10chromosomeD10:4588844..4588991 -
A10chromosomeA10:4864544..4864697 -
D10chromosomeD10:4712654..4712801 -
A10chromosomeA10:4327291..4327443 -
D10chromosomeD10:4797338..4797485 -
A10chromosomeA10:5094299..5094452 -
Gbar_D10chromosomeGbar_D10:4530534..4530678 -
Gbar_A10chromosomeGbar_A10:5006379..5006533 -
D10chromosomeD10:4614430..4614574 -
A10chromosomeA10:4910453..4910607 -
CM017632.1chromosomeCM017632.1:4550255..4550402 -
CM017619.1chromosomeCM017619.1:4945085..4945238 -
CM017658.1chromosomeCM017658.1:4660086..4660233 -
CM017645.1chromosomeCM017645.1:5215465..5215618 -
CM017710.1chromosomeCM017710.1:4616248..4616392 -
CM017697.1chromosomeCM017697.1:5031378..5031531 -
D10chromosomeD10:4735694..4735841 -
A10chromosomeA10:5133924..5134077 -
Chr10chromosomeChr10:4594196..4594349 -
Chr10chromosomeChr10:4870627..4870780 -
Chr10chromosomeChr10:4349244..4349388 -
B_10chromosomeB_10:100301496..100301640 -
Chr11chromosomeChr11:4343117..4343261 -
chr11chromosomechr11:4307540..4308080 -
Chr_11chromosomeChr_11:3730552..3730695 -
Chr11chromosomeChr11:4511161..4511305 -
Chr11chromosomeChr11:3804529..3804674 -
Chr11_430248chromosomeChr11_430248:1315..1459 -
E10chromosomeE10:108279595..108279735 +
F10chromosomeF10:4379038..4379180 -
Chr10chromosomeChr10:163144450..163144591 +
Sequence
>PGML0569 ID=PGML0569; Name=PGML0569; organism=Gossypium raimondii; type=genetic_marker; length=145bp
CACAAGCTTATTGCCAACCATTGAACTTGTAACAATGGGAGGCAAATAAA
GGTGAAAATAGCTTCTGTGGTTTTAAATAAATAAATAAAAAAGGTACAAA
TATTTTATAGGTGAAAATTTAGACTTTTGTCGTGGCATTTACTGC