PGML0561, PGML0561 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0561
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(CGGGT)4
Primer 1PGML0561_F: CCTATTAGATAGGCGCCAGTG
Primer 2PGML0561_R: CCTAGGAGTCGGGTCGAAAT
Product Length270
Publication[view all]
CommentBAC_ID=FITB5476.x2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D08chromosomeD08:44227811..44228076 +
CM018222.1chromosomeCM018222.1:41014734..41015002 +
CM018219.1chromosomeCM018219.1:23848855..23849119 +
CM018216.1chromosomeCM018216.1:7208538..7208797 +
D5_13chromosomeD5_13:1668476..1668744 +
D5_12chromosomeD5_12:8197823..8198094 +
D5_07chromosomeD5_07:17192908..17193177 +
D5_07chromosomeD5_07:6843473..6843766 +
D5_05chromosomeD5_05:3379558..3379824 +
D5_02chromosomeD5_02:44341337..44341604 +
D5_12chromosomeD5_12:16817669..16817937 -
D5_12chromosomeD5_12:4505239..4505506 -
D5_10chromosomeD5_10:32042976..32043243 -
D5_06chromosomeD5_06:54572170..54572438 -
D5_03chromosomeD5_03:10763186..10763457 -
D5_03chromosomeD5_03:43647133..43647414 -
D08chromosomeD08:40651857..40652122 +
Ghir_D08chromosomeGhir_D08:43568511..43568774 +
D08chromosomeD08:44620731..44620996 +
D08chromosomeD08:43438294..43438559 +
D08chromosomeD08:40717464..40717729 +
Gbar_D08chromosomeGbar_D08:40953429..40953697 +
Gbar_D05chromosomeGbar_D05:24303794..24304058 +
Gbar_D02chromosomeGbar_D02:7714077..7714336 +
D08chromosomeD08:43080546..43080816 +
D05chromosomeD05:24115864..24116126 +
D02chromosomeD02:7218182..7218441 +
CM017632.1chromosomeCM017632.1:55296113..55296381 -
CM017658.1chromosomeCM017658.1:57441916..57442154 -
CM017708.1chromosomeCM017708.1:41603839..41604109 +
CM017702.1chromosomeCM017702.1:7628547..7628817 +
D08chromosomeD08:44037714..44037979 +
Chr08chromosomeChr08:6181363..6181620 +
Chr02chromosomeChr02:46438002..46438267 +
Sequence
>PGML0561 ID=PGML0561; Name=PGML0561; organism=Gossypium raimondii; type=genetic_marker; length=270bp
CCTATTAGATAGGCGCCAGTGAATAAAATAATAATAAATTTTTTTTTGAA
TAAAATATTTTTTTTATATTTAATTAATAATTTTTTTAAAAAAATACGGG
TCAAAATACGGTCAACGGGTCGGGTCGGGTCGGGTGGCGCCTATCAGGTA
GGCACCAATGAAGGTGCCTCATAGAGAGGCGCCAATGAAGGTGCCTTATA
GAGAGGCGCCATTACTAGACCTGTCCATGGGCCGGGCTGGGCCCAAAAAA
ATTTCGACCCGACTCCTAGG