PGML0479, PGML0479 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0479
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TTCT)4
Primer 1PGML0479_F: TGAACAATTCAATGGCCAAA
Primer 2PGML0479_R: TAAGTTTCCAACGGTCCCAC
Product Length82
Publication[view all]
CommentBAC_ID=FITB4738.x2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A05chromosomeA05:98237960..98238040 +
D04chromosomeD04:2385003..2385084 -
CM018206.1chromosomeCM018206.1:100074184..100074264 +
CM018218.1chromosomeCM018218.1:2272208..2272289 -
D5_04chromosomeD5_04:47909631..47909712 +
KI_06chromosomeKI_06:28181705..28181786 -
Chr04_CRI-A2_v1.0.a1chromosomeChr04_CRI-A2_v1.0.a1:96028818..96028898 +
D10_04chromosomeD10_04:2199644..2199725 -
scaffold178.1supercontigscaffold178.1:1463638..1463719 +
At_chr11chromosomeAt_chr11:37208353..37208433 +
scaffold3947_D04supercontigscaffold3947_D04:120315..120396 +
A05chromosomeA05:89865319..89865399 +
Ghir_A05chromosomeGhir_A05:106867336..106867416 +
Ghir_D04chromosomeGhir_D04:2364700..2364781 -
A05chromosomeA05:108395489..108395569 +
D04chromosomeD04:2459542..2459623 -
A05chromosomeA05:106971499..106971579 +
D04chromosomeD04:2241687..2241768 -
A05chromosomeA05:104925747..104925827 +
D04chromosomeD04:2241948..2242029 -
Scaffold646supercontigScaffold646:61631..61711 +
Gbar_D04chromosomeGbar_D04:2245805..2245886 -
A05chromosomeA05:105177945..105178025 +
D04chromosomeD04:2295136..2295217 -
CM017614.1chromosomeCM017614.1:102557416..102557496 +
CM017626.1chromosomeCM017626.1:2394097..2394178 -
CM017640.1chromosomeCM017640.1:111107956..111108036 +
CM017652.1chromosomeCM017652.1:2408713..2408794 -
CM017692.1chromosomeCM017692.1:103064178..103064258 +
CM017704.1chromosomeCM017704.1:2470381..2470462 -
A05chromosomeA05:108744214..108744294 +
D04chromosomeD04:2684046..2684127 -
Chr04chromosomeChr04:2673478..2673558 -
Chr04chromosomeChr04:2614096..2614176 -
Chr04chromosomeChr04:48341001..48341082 +
B_02chromosomeB_02:82388710..82388791 +
Chr12chromosomeChr12:2454855..2454936 -
chr12chromosomechr12:2349648..2349729 -
chr12chromosomechr12:2350266..2350351 -
Chr_12chromosomeChr_12:1791655..1791740 -
Chr12chromosomeChr12:2373939..2374020 -
Chr12chromosomeChr12:2399108..2399188 -
Chr12chromosomeChr12:1654749..1654830 -
Chr12chromosomeChr12:2265568..2265647 -
E04chromosomeE04:3542921..3543002 -
F04chromosomeF04:2271720..2271801 -
Sequence
>PGML0479 ID=PGML0479; Name=PGML0479; organism=Gossypium raimondii; type=genetic_marker; length=82bp
TGAACAATTCAATGGCCAAATGTTGGGTTAATAGCTTGAAGTTTCTTTCT
TTCTTTCTAATGGTGGGACCGTTGGAAACTTA