PGML0468, PGML0468 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0468
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATTT)4
Primer 1PGML0468_F: TTCTTGAAGCTGCCCATTCT
Primer 2PGML0468_R: TGAGTTCATACAGGGATTTGTTCA
Product Length190
Publication[view all]
CommentBAC_ID=FITB8614.y2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D02chromosomeD02:6975187..6975380 +
D02chromosomeD02:6820422..6820611 -
D02chromosomeD02:7094765..7094954 -
D02chromosomeD02:6934690..6934861 -
D5_03chromosomeD5_03:57457867..57458056 +
D5_03chromosomeD5_03:57559357..57559528 +
D10_03chromosomeD10_03:58937998..58938191 +
D10_03chromosomeD10_03:58975489..58975686 +
D02chromosomeD02:6821847..6822040 +
scaffold3784_D02supercontigscaffold3784_D02:7520..7691 -
D02chromosomeD02:6705751..6705940 -
D02chromosomeD02:6906275..6906464 -
D02chromosomeD02:6393565..6393758 +
D02chromosomeD02:6292795..6292984 -
D02chromosomeD02:6468976..6469165 -
D02chromosomeD02:6361380..6361569 -
D02chromosomeD02:6374213..6374406 +
D02chromosomeD02:6290323..6290512 -
D02chromosomeD02:6440731..6440920 -
D02chromosomeD02:6335813..6335984 -
CM017624.1chromosomeCM017624.1:6967264..6967449 -
CM017702.1chromosomeCM017702.1:6690793..6690986 +
CM017702.1chromosomeCM017702.1:6597177..6597366 -
CM017702.1chromosomeCM017702.1:6779457..6779646 -
CM017702.1chromosomeCM017702.1:6656953..6657124 -
D02chromosomeD02:6834501..6834694 +
D02chromosomeD02:6697099..6697288 -
D02chromosomeD02:6919409..6919598 -
D02chromosomeD02:6794003..6794174 -
Chr03chromosomeChr03:5891968..5892157 -
Chr03chromosomeChr03:6055842..6056031 -
B_03chromosomeB_03:100011170..100011358 +
Chr05chromosomeChr05:6702686..6702875 +
Chr05chromosomeChr05:6792525..6792719 -
Chr05chromosomeChr05:6715362..6715556 -
Chr05chromosomeChr05:3948803..3948991 -
Sequence
>PGML0468 ID=PGML0468; Name=PGML0468; organism=Gossypium raimondii; type=genetic_marker; length=190bp
TTCTTGAAGCTGCCCATTCTACCTTTCACATAGTAGATTAACAATCTCAC
TGTTTTTGTGAGGATTAAGATATCAGTTAAATTGAATAAATTAAAATAAC
TGAATTTATTTATTTATTCTATTTGCTTATTTGGTTTAGATAGCTGATTA
TCAATTTTGAATATTCTGAACAAATCCCTGTATGAACTCA