PGML0419, PGML0419 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0419
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TATTAA)4
Primer 1PGML0419_F: TTGTCTTGATTTGGGTCAAGC
Primer 2PGML0419_R: CCCAAGCCTAGTTTGTCCA
Product Length194
PolymorphismP_ PGML0419
Publication[view all]
CommentBAC_ID=FITB4258.y1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D05chromosomeD05:53236421..53236609 +
A04chromosomeA04:11039823..11040014 -
CM018219.1chromosomeCM018219.1:52036401..52036589 +
CM018205.1chromosomeCM018205.1:10868786..10868977 -
D5_05chromosomeD5_05:46860440..46860633 +
Chr05_CRI-A2_v1.0.a1chromosomeChr05_CRI-A2_v1.0.a1:84842368..84842559 -
D10_05chromosomeD10_05:11671005..11671191 -
CM016618.1chromosomeCM016618.1:15242813..15243000 -
Dt_chr9chromosomeDt_chr9:28989465..28989653 +
D05chromosomeD05:51291106..51291294 +
A04chromosomeA04:10604820..10605011 -
Ghir_D05chromosomeGhir_D05:52274950..52275138 +
D05chromosomeD05:53294391..53294579 +
A04chromosomeA04:11339565..11339756 -
D05chromosomeD05:54026996..54027184 +
A04chromosomeA04:10619533..10619724 -
D05chromosomeD05:52669316..52669504 +
A04chromosomeA04:10401579..10401770 -
Gbar_D05chromosomeGbar_D05:52111866..52112054 +
Gbar_A04chromosomeGbar_A04:10921856..10922047 -
D05chromosomeD05:53957740..53957928 +
A04chromosomeA04:10607264..10607455 -
CM017627.1chromosomeCM017627.1:52827393..52827581 +
CM017653.1chromosomeCM017653.1:54142928..54143117 +
CM017639.1chromosomeCM017639.1:12610508..12610699 -
CM017705.1chromosomeCM017705.1:53123157..53123345 +
CM017691.1chromosomeCM017691.1:10692297..10692488 -
D05chromosomeD05:54906463..54906651 +
A04chromosomeA04:12098860..12099051 -
Chr05chromosomeChr05:80622951..80623142 +
Chr05chromosomeChr05:84814722..84814913 +
Chr05chromosomeChr05:48186909..48187101 +
B_05chromosomeB_05:13359562..13359756 -
Chr_09chromosomeChr_09:37990724..37990910 +
Chr09chromosomeChr09:51418956..51419143 +
Chr09chromosomeChr09:36489012..36489199 +
F05chromosomeF05:66197763..66197951 +
Sequence
>PGML0419 ID=PGML0419; Name=PGML0419; organism=Gossypium raimondii; type=genetic_marker; length=194bp
TTGTCTTGATTTGGGTCAAGCTTAGGCTTATATTTTTAATTTCTTTGTTT
GATCTGTTTAATTGTTTAAAAATAATAAAAAATAATTGTATATTAATATT
AATATTAATATAATATTATAATTAAATTTAAATAAAAATACTTTTTATTA
TTTTTAAATAATAAAATGGACCATTTGGACAAACTAGGCTTGGG