PGML0389, PGML0389 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0389
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TA)13
Primer 1PGML0389_F: ATTTGCTGACGGCTTTGAAT
Primer 2PGML0389_R: GGATGCGAATGCGTTTAACT
Product Length135
Publication[view all]
CommentBAC_ID=FITB5229.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D04chromosomeD04:48227101..48227234 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018218.1chromosomeCM018218.1:46322837..46322967 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_04chromosomeD5_04:7683248..7683382 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr12chromosomeDt_chr12:30036890..30037023 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D04chromosomeD04:43243292..43243425 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D04chromosomeGhir_D04:48097983..48098114 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D04chromosomeD04:49061539..49061672 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D04chromosomeD04:47991096..47991229 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D04chromosomeD04:45980859..45980992 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D04chromosomeGbar_D04:44425127..44425257 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D04chromosomeD04:49479687..49479817 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017626.1chromosomeCM017626.1:46595819..46595947 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017652.1chromosomeCM017652.1:49474980..49475110 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017704.1chromosomeCM017704.1:46623783..46623913 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D04chromosomeD04:49821122..49821255 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:7639533..7639667 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr12chromosomeChr12:46338774..46338902 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr12chromosomechr12:23059365..23059491 +Gossypium armourianum (D2-1) genome ISU_v1n/a
E04chromosomeE04:93724072..93724221 +Gossypium stocksii (E1) genome NSF_v1n/a
Sequence
>PGML0389 ID=PGML0389; Name=PGML0389; organism=Gossypium raimondii; type=genetic_marker; length=135bp
ATTTGCTGACGGCTTTGAATTTAAAAGTATTTGAAATTTGAAATATATAT
ATATATATATATATATATACCATTAAAGTTGATGAGACAACAACTATGAA
TTTGTCATATAATCAAGTTAAACGCATTCGCATCC