PGML0382, PGML0382 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0382
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TA)7
Primer 1PGML0382_F: ATGCGTGGGTGGTAATACAT
Primer 2PGML0382_R: CGCACTTAGCATTTCCCAAT
Product Length386
Publication[view all]
CommentBAC_ID=FITB904.y2 1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D08chromosomeD08:23024037..23024383 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018222.1chromosomeCM018222.1:22111184..22111530 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_08chromosomeD5_08:20689279..20689664 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_08chromosomeD10_08:27861870..27862253 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr4chromosomeDt_chr4:32563128..32563474 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D08chromosomeD08:21820490..21820836 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D08chromosomeGhir_D08:22080361..22080707 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A13chromosomeGhir_A13:50271939..50272277 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D08chromosomeD08:21531974..21532320 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D08chromosomeD08:21261106..21261452 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D08chromosomeD08:21738182..21738528 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D08chromosomeGbar_D08:22027741..22028087 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D08chromosomeD08:22276253..22276599 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017630.1chromosomeCM017630.1:22013901..22014247 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017656.1chromosomeCM017656.1:23573361..23573707 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017708.1chromosomeCM017708.1:22207958..22208304 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D08chromosomeD08:22105869..22106215 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:20702121..20702506 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr04chromosomeChr04:21320108..21320485 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_04chromosomeChr_04:15246267..15246651 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr04chromosomeChr04:22341524..22341909 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr04chromosomeChr04:22380443..22380828 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr04chromosomeChr04:14825451..14825836 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0382 ID=PGML0382; Name=PGML0382; organism=Gossypium raimondii; type=genetic_marker; length=386bp
ATGCGTGGGTGGTAATACATATATTATATATATGCATGGCTTTATTTCAA
ATAATATATATTAATAGATTTTGGTGTTATATATATAATATAATATATAT
GCATAGTTATATTGTATACAGTATCTATAATTATGGGTATGGTTTAATAT
AATTTATACATTTATGAGACTTTTAATGTATACTTAAAATTTGAAGTGAC
AATGGTCACTAAATAAATAGGTATATATATTCGTATATGATTTTGTAATA
TTTACGAACATATATAAGAATAAATGATATAATGTGGACTCTTACGCATT
CACGAACTCATGAATGAATTATGAGATTTATGATATTGCGAGTTTTAATT
AGTGTAAAATGATATTATTGGGAAATGCTAAGTGCG