PGML0376, PGML0376 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0376
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AT)10
Primer 1PGML0376_F: ACCGTAAGTAAATGCACCGC
Primer 2PGML0376_R: TCCAACATCTCAATCTTACTCTCAA
Product Length145
Publication[view all]
CommentBAC_ID=FITB858.y2 1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D02chromosomeD02:69064536..69064670 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
scaffold_1738supercontigscaffold_1738:8993..9127 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018216.1chromosomeCM018216.1:65259791..65259924 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_03chromosomeD5_03:1616199..1616341 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr5chromosomeDt_chr5:9196829..9196963 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:65658578..65658712 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
D02chromosomeD02:68150016..68150150 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:69462060..69462194 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:66577767..66577901 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:66004033..66004166 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:67204707..67204840 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:68244955..68245088 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:69888554..69888690 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:66811318..66811451 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:70544619..70544753 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr03chromosomeChr03:61461031..61461175 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Sequence
>PGML0376 ID=PGML0376; Name=PGML0376; organism=Gossypium raimondii; type=genetic_marker; length=145bp
ACCGTAAGTAAATGCACCGCCCATCCAAACTCACCCTAAATCTCAAAATT
GTATATATATATATATATATATTTGGTATAATTATATATAAAAAAAATTA
ATCTTATGTAAGAATTTTGATTGAGAGTAAGATTGAGATGTTGGA