PGML0375, PGML0375 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0375
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(GTGCG)4
Primer 1PGML0375_F: TGAACTAAATTGTGAATTAAGACGG
Primer 2PGML0375_R: GCGGTGCATTTACTTACGGT
Product Length185
Publication[view all]
CommentBAC_ID=FITB858.y2 1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D02chromosomeD02:69064359..69064555 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
scaffold_1738supercontigscaffold_1738:9108..9304 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018216.1chromosomeCM018216.1:65259614..65259810 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_03chromosomeD5_03:1616322..1616506 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr5chromosomeDt_chr5:9196652..9196848 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:65658401..65658597 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:68127130..68127326 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:68149839..68150035 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:69461883..69462079 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:66577590..66577786 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:66003856..66004052 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:67204530..67204726 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:68244778..68244974 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017702.1chromosomeCM017702.1:66811141..66811337 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:70544442..70544638 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr03chromosomeChr03:61460866..61461050 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Sequence
>PGML0375 ID=PGML0375; Name=PGML0375; organism=Gossypium raimondii; type=genetic_marker; length=185bp
TGAACTAAATTGTGAATTAAGACGGTATCAAATTAAAAGATAAATATTTA
ACTTAATAAATAAGGGTTGGGTGCGGTGCGGTGCGGTGCGTTTGGCTTAC
TTTTTGTCTCACGCTACAGTGTCGCTACAGTATCTAATCTCACCGCCACT
GCCATTTTTACACTAACCGTAAGTAAATGCACCGC