PGML0358, PGML0358 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0358
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TTATT)3
Primer 1PGML0358_F: CCCAATTCACATGTCGTACATTA
Primer 2PGML0358_R: TAGCCAATCTCAGCCTTCCA
Product Length110
Publication[view all]
CommentBAC_ID=FITB3476.y2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D10chromosomeD10:200859..200968 -
A10chromosomeA10:199709..199818 -
CM018224.1chromosomeCM018224.1:209625..209734 -
CM018211.1chromosomeCM018211.1:180981..181090 -
D5_10chromosomeD5_10:62231593..62231702 +
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:129261803..129261912 +
CM016623.1chromosomeCM016623.1:358912..359021 -
scaffold413.1supercontigscaffold413.1:959316..959425 +
scaffold26.1supercontigscaffold26.1:3203755..3203864 +
D10chromosomeD10:153510..153619 -
A10chromosomeA10:182090..182199 -
Ghir_D10chromosomeGhir_D10:443636..443745 -
Ghir_D10chromosomeGhir_D10:207230..207339 -
D10chromosomeD10:230302..230411 -
D10chromosomeD10:230479..230588 -
A10chromosomeA10:214175..214284 -
Gbar_D10chromosomeGbar_D10:197880..197989 -
Gbar_A10chromosomeGbar_A10:263380..263489 -
D10chromosomeD10:240248..240357 -
A10chromosomeA10:237458..237567 -
CM017632.1chromosomeCM017632.1:210571..210680 -
CM017619.1chromosomeCM017619.1:223077..223186 -
CM017658.1chromosomeCM017658.1:254693..254802 -
CM017645.1chromosomeCM017645.1:261244..261353 -
CM017710.1chromosomeCM017710.1:203005..203114 -
CM017697.1chromosomeCM017697.1:238800..238909 -
D10chromosomeD10:178891..179000 -
A10chromosomeA10:193718..193827 -
Chr10chromosomeChr10:277418..277527 -
Chr10chromosomeChr10:249107..249216 -
Chr10chromosomeChr10:161693..161802 -
B_10chromosomeB_10:95537343..95537452 -
Chr11chromosomeChr11:191938..192047 -
Chr11chromosomeChr11:176821..176930 -
Chr11chromosomeChr11:154616..154725 -
Chr11chromosomeChr11:144276..144385 -
E10chromosomeE10:113707286..113707395 +
F10chromosomeF10:204733..204842 -
Chr10chromosomeChr10:169460562..169460671 +
Sequence
>PGML0358 ID=PGML0358; Name=PGML0358; organism=Gossypium raimondii; type=genetic_marker; length=110bp
CCCAATTCACATGTCGTACATTATTACTTGATTGCATTTGTCGTAAATAT
TGTCTGCCATGTGAATTTATTTTATTTTATTTATACGTTTTGGAAGGCTG
AGATTGGCTA