PGML0325, PGML0325 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0325
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TATG)3
Primer 1PGML0325_F: TTTCTTTCAATTTCCCTTCCC
Primer 2PGML0325_R: TCTAAGTTAAATTGCAGTAGAGACAAA
Product Length357
Publication[view all]
CommentBAC_ID=FITB3733.x2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D13chromosomeD13:53924095..53924393 +
A13chromosomeA13:92416734..92417090 +
CM018227.1chromosomeCM018227.1:49897979..49898277 +
CM018214.1chromosomeCM018214.1:96559788..96560144 +
D5_13chromosomeD5_13:48505961..48506316 +
Chr13_CRI-A2_v1.0.a1chromosomeChr13_CRI-A2_v1.0.a1:110826878..110827234 +
D10_13chromosomeD10_13:50695736..50696092 +
CM016626.1chromosomeCM016626.1:141069634..141069990 +
Dt_chr7chromosomeDt_chr7:20498666..20499022 +
Dt_chr13chromosomeDt_chr13:19469180..19469478 -
D13chromosomeD13:49711050..49711348 +
A13chromosomeA13:68821666..68822022 +
Ghir_D13chromosomeGhir_D13:52889037..52889333 +
Ghir_A13chromosomeGhir_A13:96107901..96108257 +
D13chromosomeD13:54005112..54005410 +
A13chromosomeA13:98774518..98774874 +
D13chromosomeD13:53054850..53055148 +
A13chromosomeA13:97001768..97002124 +
D13chromosomeD13:49967189..49967487 +
A13chromosomeA13:95029671..95030027 +
Gbar_D13chromosomeGbar_D13:49575172..49575470 +
Gbar_A13chromosomeGbar_A13:97328861..97329217 +
D13chromosomeD13:50944846..50945144 +
A13chromosomeA13:100787175..100787531 +
CM017635.1chromosomeCM017635.1:50585617..50585915 +
CM017622.1chromosomeCM017622.1:98192235..98192589 +
CM017661.1chromosomeCM017661.1:53875510..53875808 +
CM017648.1chromosomeCM017648.1:103299756..103300112 +
CM017700.1chromosomeCM017700.1:98574991..98575347 +
D13chromosomeD13:54085179..54085477 +
A13chromosomeA13:99391624..99391980 +
Chr13chromosomeChr13:104172067..104172423 +
Chr13chromosomeChr13:108812548..108812904 +
Chr13chromosomeChr13:48499614..48499970 +
B_13chromosomeB_13:14110297..14110653 -
Chr13chromosomeChr13:50030533..50030889 +
chr13chromosomechr13:36649058..36649414 +
Chr13chromosomeChr13:52422643..52423003 +
Chr13chromosomeChr13:34014722..34015045 +
Chr13chromosomeChr13:26487329..26487685 +
Chr13chromosomeChr13:33208932..33209288 +
E13chromosomeE13:100372067..100372423 +
F13chromosomeF13:84555229..84555585 +
Sequence
>PGML0325 ID=PGML0325; Name=PGML0325; organism=Gossypium raimondii; type=genetic_marker; length=357bp
TTTCTTTCAATTTCCCTTCCCCTTCCCATTATAGAGGAAGAGATTACTGT
TAAATATGGTTGTCTTTTAACAACTGCTCATTAGTTTCTTTACCTATCAC
AGGTGTGCTATATAATACTTTTGGGTACTAAATAAGTTGCTTCACTAATT
GAAAACTTAAAAAGGGATTTTGCTGCCAATGTTTATGTTCTGTCAAGAAG
AAAATTCCATTTATATGTTGATTAATTATGCTGGTATACATATTTTTGTT
TGATTCCCTAGCTTGTTTTGGCTAACCTCCGCTGACCTGCCACCTCATTA
TGTATGTATGTATATTAGTTTCCTTTCTTTTTTGTCTCTACTGCAATTTA
ACTTAGA