PGML0249, PGML0249 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0249
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TAAAA)3
Primer 1PGML0249_F: GCTCCAATTTGTATCTAACCGC
Primer 2PGML0249_R: TCGTTGCTTGACAAATTGTTCT
Product Length239
Publication[view all]
CommentBAC_ID=FITB5476.y1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D12chromosomeD12:45941133..45941371 -
A12chromosomeA12:80389570..80390198 -
CM018226.1chromosomeCM018226.1:42776853..42777091 -
CM018213.1chromosomeCM018213.1:77378992..77379231 -
D5_12chromosomeD5_12:16816066..16816303 +
Chr12_CRI-A2_v1.0.a1chromosomeChr12_CRI-A2_v1.0.a1:23729819..23730058 +
D10_12chromosomeD10_12:37757705..37757943 -
CM016625.1chromosomeCM016625.1:109436295..109436526 -
scaffold1909.1supercontigscaffold1909.1:222564..222991 +
D12chromosomeD12:42112793..42113031 -
A12chromosomeA12:66574892..66575520 -
Ghir_D12chromosomeGhir_D12:45178922..45179160 -
Ghir_A12chromosomeGhir_A12:85076327..85076955 -
D12chromosomeD12:44317313..44317551 -
A12chromosomeA12:86091297..86091924 -
D12chromosomeD12:45151507..45151745 -
A12chromosomeA12:83170781..83171408 -
D12chromosomeD12:43005638..43005876 -
A12chromosomeA12:80317529..80318157 -
Gbar_D12chromosomeGbar_D12:42037934..42038172 -
Gbar_A12chromosomeGbar_A12:79815493..79815732 -
D12chromosomeD12:43288980..43289218 -
A12chromosomeA12:79347505..79347744 -
CM017634.1chromosomeCM017634.1:43226252..43226490 -
CM017634.1chromosomeCM017634.1:39360578..39360816 -
CM017621.1chromosomeCM017621.1:80919238..80919866 -
CM017660.1chromosomeCM017660.1:45591650..45591888 -
CM017647.1chromosomeCM017647.1:83875034..83875662 -
CM017712.1chromosomeCM017712.1:43844516..43844754 -
CM017699.1chromosomeCM017699.1:79751160..79751399 -
D12chromosomeD12:45128203..45128441 -
A12chromosomeA12:86507419..86508047 -
Chr12chromosomeChr12:86432612..86433240 -
Chr12chromosomeChr12:93635355..93635983 -
Chr12chromosomeChr12:40975510..40975747 -
B_12chromosomeB_12:66668191..66668429 -
Chr08chromosomeChr08:41301196..41301434 -
Chr_08chromosomeChr_08:29347507..29347742 -
Chr08chromosomeChr08:42357210..42357448 -
Chr08chromosomeChr08:28866195..28866433 -
Chr08chromosomeChr08:27869126..27869364 -
F12chromosomeF12:71268755..71268997 -
Chr12chromosomeChr12:23712273..23712510 +
Sequence
>PGML0249 ID=PGML0249; Name=PGML0249; organism=Gossypium raimondii; type=genetic_marker; length=239bp
GCTCCAATTTGTATCTAACCGCTCTTATATATACTATAAGTAACTTCAAA
TTAAGTTTTAATTAGATGTTTATTATTATTAAGTCTATATAAAATATTAT
TTATTATAAAATAAAATAAAATATAATTGTTAAAGGAAAATGGTTTTATA
ATATGTTGTAACAAATATATTTATGCTGTGTTTGTTTTACTAAAAACTAA
TTTCAAAAAATTATTTCAGAACAATTTGTCAAGCAACGA