PGML0637, PGML0637 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0637
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(CTTT)3
Primer 1PGML0637_F: TCAAATACTACACGCTGCGG
Primer 2PGML0637_R: CAATTTATCAAATAATTCTTAATTCCC
Product Length106
Publication[view all]
CommentBAC_ID=FITB2171.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:67161635..67162082 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018224.1chromosomeCM018224.1:64099945..64100049 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:921168..921273 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
KI_10chromosomeKI_10:711093..711266 +Gossypioides kirkii genome ISU_v3n/a
D10_10chromosomeD10_10:931720..931827 +Gossypium turneri (D10) genome NSF_v1_a2n/a
scaffold613.1supercontigscaffold613.1:91793..92240 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:62811716..62812163 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:66878139..66878586 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:65056305..65056752 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:63307133..63307580 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:64729825..64729929 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:65881225..65881329 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:64665293..64665396 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:66815751..66815855 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:64945520..64945624 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:67186199..67186646 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:61015724..61015829 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_10chromosomeB_10:1241747..1241858 +Gossypium anomalum (B1) genome NSF_v1n/a
Chr11chromosomeChr11:63095217..63095322 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_11chromosomeChr_11:43063652..43063761 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr11chromosomeChr11:64828644..64828756 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr11chromosomeChr11:48636569..48636670 -Gossypium aridum (D4) genome ISU_v1n/a
Chr11chromosomeChr11:35417223..35417332 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr11chromosomeChr11:47726491..47727085 -Gossypium lobatum (D7) genome ISU_v1n/a
Chr11chromosomeChr11:47726173..47726595 -Gossypium lobatum (D7) genome ISU_v1n/a
F10chromosomeF10:94092630..94092738 -Gossypium longicalyx (F1) genome NSF_v1n/a
Sequence
>PGML0637 ID=PGML0637; Name=PGML0637; organism=Gossypium raimondii; type=genetic_marker; length=106bp
TCAAATACTACACGCTGCGGCCCACGCAACTGGTTTATAGTGTTAATTTC
TTTCTTTCTTTAAAAAAAAAATTATATTAGGGAATTAAGAATTATTTGAT
AAATTG