Gate3CC02, Gate3CC02 (genetic_marker) Gossypium arboreum

Marker Overview


Name	Gate3CC02
Genbank ID	CK640537
Type	RFLP
Species	Gossypium arboreum
Germplasm	AKA 8401
Source Type	cDNA
Restriction Enzyme	EcoRI; XhoI
Publication	[view all]

Cross References

External references for this genetic_marker


Database	Accession
DB:genbank	CK640537

Publications


Year	Publication
2004	Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417.

Germplasm


Stock Name	Type
AKA 8401	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Palmeri x K-101, F2 (2007)	AD_ch01_At.01	N/A	35.7	Gate3CC02a	View
2	Palmeri x K-101, F2 (2007)	AD_ch01_At.01	N/A	44.8	Gate3CC02b	View
3	Palmeri x K-101, F2 (2007)	AD_ch15_Dt.01	N/A	41.1	Gate3CC02c	View
4	AD-genome wide Reference Map (2009)	AD_ch01_At.01	N/A	22	gate3cc02	View
5	AD-genome wide Reference Map (2009)	AD_ch15_Dt.01	N/A	37	gate3cc02	View

Sequence

>Gate3CC02 ID=Gate3CC02; Name=Gate3CC02; organism=Gossypium arboreum; type=genetic_marker; length=400bp
TTTTTTTTTTTTTTTTTTTTTTTGGGTCGACTCATTTCAAAAATTTATTA
ATTAATGAAAAATAGGTCGTTCCAATTCAAACAAACATAAATAATAAAGT
AAACATAAAAAAAAATTAAACTATTAATTTCGACATCCTAACCTTATCCT
CCATAAGAAAAAAGCAATCCCAAGTGCTTACAATGCATCTTGGGAGGCAT
CAATTTGAGTGTTGATGCTCTTATCTTGAATCACCTCTTTATGTTCCTTC
CCTGCAAATTCCGAGGCATTTATTTGGTGGTTGTTGTTGATGATGATCTT
ATTTTGCATTTCTTTTGGTATTTCCTCTTCAGTTGTTGCACTTTCCAAGG
CATTAATTTGGTTGTTGTTGTCGTCGTCAATGATGTTATTTTGCATCTCA

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Gate3CC02, Gate3CC02 (genetic_marker) Gossypium arboreum