PXP0050, PXP0050 (genetic_marker) Gossypium barbadense

Marker Overview


Name	PXP0050
Genbank ID	AF060590
Type	RFLP
Species	Gossypium barbadense
Germplasm	Pima S-6
Source Type	Genomic
Publication	[view all]

Cross References

External references for this genetic_marker


Database	Accession
DB:genbank	AF060590

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_29	supercontig	scaffold_29:218774..219103 -
At_chr8	chromosome	At_chr8:68767027..68767356 +
At_chr1	chromosome	At_chr1:27105027..27105356 -
scaffold2939_A11	supercontig	scaffold2939_A11:89333..89662 +
Ghir_A11	chromosome	Ghir_A11:79169264..79169593 +
A11	chromosome	A11:77089187..77089516 +
A11	chromosome	A11:76002848..76003177 +
A11	chromosome	A11:73811990..73812319 +
A11	chromosome	A11:78599774..78600103 +

Publications


Year	Publication
1998	Zhao XP, Si Y, Hanson RE, Crane CF, Price HJ, Stelly DM, Wendel JF, Paterson AH. Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton. Genome research. 1998 May; 8(5):479-92

Germplasm


Stock Name	Type
Pima S-6	accession

Sequence

>PXP0050 ID=PXP0050; Name=PXP0050; organism=Gossypium barbadense; type=genetic_marker; length=330bp
CCCCATCACCCTCGATGATGCCATTGCTGTTGGCAATGATAGTTTTATTG
ATCGGAGTTTACTGCTTTGAGGTTAAATCATGTCCTTCGACATCAACATG
GTGGTGGTGGTGGTAGTCTGAATGTTGGACAAAACACGTTAGCGAAAAAA
ATATAAATATAAATAAACAAATAAAATATAAATTGAATAATACTAGATAT
TGATGCCTATTTTAGACAGCTTCCTTATGTAACACCCCGAACCCGAAACC
GACACCGGAGTCGAACACGAGGTGTTAACTGACTTTAACCCCTTATAAAA
TTTATTTTCCAGACACTGCCCAATCTGTGT

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PXP0050, PXP0050 (genetic_marker) Gossypium barbadense