A1400, A1400 (genetic_marker) Gossypium herbaceum

Marker Overview
NameA1400
Genbank IDCA994084
TypeRFLP
SpeciesGossypium herbaceum
GermplasmM-881-8
Source TypecDNA
Restriction EnzymePst1
Publication[view all]
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCA994084
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM017646.1chromosomeCM017646.1:19184777..19185843 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
Chr11chromosomeChr11:20074739..20075805 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Germplasm
Stock NameType
M-881-8accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Gtr x Gra, F2 (2004)D.11N/A97.9A1400View
2Palmeri x K-101, F2 (2007)AD_ch21_Dt.11N/A100A1400View
3AD-genome wide Reference Map (2009)AD_ch21_Dt.11N/A175A1400View
4TM-1 x WT-936, F2 (2005)AD_ch11_At.11N/A17.7A1400View
Sequence
>A1400 ID=A1400; Name=A1400; organism=Gossypium herbaceum; type=genetic_marker; length=1069bp
AATGAAACGCACCACTTGAAAAATGAATTAAAAAACACCTTTTATTTTAT
TTCTCTCGTAACAGTATTCTACTTTTTTTTGCTCACACCTTTATTACATT
CTTCAACATGTACGTACGTGAATGATGTCTAAGATAATTTGACAGTCATC
AAAGCATCATCATCCTTATTCTACGAAATTACGTATATATTATATAAATT
TTTAAAAGGCAGTGTATTTCAATTATTTGTAGTGCGTGTGTAAACTTGTC
AATCCAGCAAATGCAAGAACAAAATCGAAAATTTTATCAGTACTCGTAAA
AGTATGGTTAACTTGTTGACAAATGTACATGTGAGGTTTTACATAATCTT
TACAAACCAGAAGCTAACTATCAAAAAAGAAACTGACCATTTGGATACTA
TGGGTAAAGAAGGAAGAAGAAGAAGCTCAGTTAATGAACATAAAGAGAAG
GAAAATAGGCAACTCCGAGACACAAAACAATAAAAGAATGATATTAGTTC
CTCTAACCTATAATTTCTATGTTTTCTCCTCTTAGGATCCTAAAGATATT
AACTCTGTATCGAACTGCTCGAGTCGCTTCGATTATGCAAGTTGGAAGAT
CATTGCATCTTTTAAACTCAATACTCACAGTGTGGTAACACTCGAATTAC
TTCAGCCTCGTGCGCAGTTCTGACTGCAAAATTCCAGAATTAAAAGAAAT
CAGCTTAAGGAGTTGCACACCATGACCTAGAGAATTTCTAGTGTGCATCA
GTCTCCACTAAAACAATCATGTCTGCCATATGAATGCAAAATATCACGTA
CACATGGGAGCCCTGGACTAAAAAATGGATCTAGCATATGCTTGCTTACT
GGATATCGATTTCCATCTGTTGATTTGTTATGTCCAGGATTTGAGGGTTG
TGATCTTCGGACTCCACGAATTCGTCCTTGAATAAAACCCTGTGCATGAT
TATAAATGCTGTACACCATTGCACCAAAAATATCATGCAAGATATAAGCT
TAGTAAAAAAAAAACAAACAAACTGTAAACTTGAAGAATCTGACATTCAA
GGGTCAAAAGTAGGTCCTT