PGML0220, PGML0220 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0220
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAAAT)3
Primer 1PGML0220_F: TTTACAATGCACAATGATGGC
Primer 2PGML0220_R: TTACAGATTTGTTTACATCCTTGAGT
Product Length269
Publication[view all]
CommentBAC_ID=FITB5130.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D02chromosomeD02:10735830..10736095 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018216.1chromosomeCM018216.1:9947602..9947868 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_03chromosomeD5_03:54038159..54038427 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_03chromosomeD10_03:55387699..55387966 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr5chromosomeDt_chr5:50252168..50252433 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:10433626..10433891 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:10247586..10247851 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:9907733..9907998 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:10289242..10289506 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:10249239..10249504 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:10458131..10458397 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:9904668..9904934 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:10601874..10602140 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:10905092..10905357 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:10448807..10449073 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:10557736..10558001 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:10415321..10415582 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr05chromosomeChr05:8563197..8563458 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0220 ID=PGML0220; Name=PGML0220; organism=Gossypium raimondii; type=genetic_marker; length=269bp
TTTACAATGCACAATGATGGCAAAATTATGGTATTAACAAAATAAGCATA
ATATTCAATAAAATAATGACAATAAAATAAAATAAAATAGCTACATAGGT
ACAAACAAAATAACATCAAAATGAAATAATAAAAAATAAAATAAAATGAT
TGTAGTAAAGGTAATGAGGGTAAAATAGTAAATGACTATAACATGATAAT
AATAATAGTAACAATAATCATCTCTAATGACAAAAAAAAAACTACTCAAG
GATGTAAACAAATCTGTAA