PGML0219, PGML0219 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0219
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TAAAA)3
Primer 1PGML0219_F: CAATGCACAATGATGGCAA
Primer 2PGML0219_R: ACCCTCATTACCTTTACTACAATCA
Product Length167
Publication[view all]
CommentBAC_ID=FITB5130.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D02chromosomeD02:10735834..10736000 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018216.1chromosomeCM018216.1:9947606..9947772 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_03chromosomeD5_03:54038257..54038423 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_03chromosomeD10_03:55387796..55387962 -Gossypium turneri (D10) genome NSF_v1_a2n/a
CM016616.1chromosomeCM016616.1:138404803..138404964 -Gossypium australe (G2) genome CRI_v1.1n/a
Dt_chr5chromosomeDt_chr5:50252263..50252429 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:10433630..10433796 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:10247590..10247756 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:9907737..9907903 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:10289246..10289411 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:10249243..10249409 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:10458135..10458301 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:9904672..9904838 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:10601878..10602044 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:10905096..10905261 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:10448811..10448977 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:10557740..10557906 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
B_03chromosomeB_03:95199925..95200090 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr_05chromosomeChr_05:7602426..7602592 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr05chromosomeChr05:10415325..10415486 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr05chromosomeChr05:7523707..7524021 +Gossypium aridum (D4) genome ISU_v1n/a
E03chromosomeE03:14195878..14196048 +Gossypium stocksii (E1) genome NSF_v1n/a
Chr03chromosomeChr03:185093742..185093906 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
Sequence
>PGML0219 ID=PGML0219; Name=PGML0219; organism=Gossypium raimondii; type=genetic_marker; length=167bp
CAATGCACAATGATGGCAAAATTATGGTATTAACAAAATAAGCATAATAT
TCAATAAAATAATGACAATAAAATAAAATAAAATAGCTACATAGGTACAA
ACAAAATAACATCAAAATGAAATAATAAAAAATAAAATAAAATGATTGTA
GTAAAGGTAATGAGGGT