PGML0136, PGML0136 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0136
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AACGC)2
Primer 1PGML0136_F: CATCAAAGCTTAAACCAGAGGAA
Primer 2PGML0136_R: CTCCCATAAGGGTGAGGACA
Product Length346
Publication[view all]
CommentBAC_ID=FITB6859.y2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A13chromosomeA13:14744700..14745036 +
D13chromosomeD13:7887487..7887831 -
CM018214.1chromosomeCM018214.1:14183544..14183880 +
CM018227.1chromosomeCM018227.1:7347175..7347514 -
D5_13chromosomeD5_13:7037320..7037665 -
KI_13chromosomeKI_13:4168829..4169173 -
Chr13_CRI-A2_v1.0.a1chromosomeChr13_CRI-A2_v1.0.a1:8691355..8691691 -
D10_13chromosomeD10_13:7316689..7317050 -
CM016626.1chromosomeCM016626.1:39288360..39288716 -
At_chr13chromosomeAt_chr13:76837688..76838024 -
A13chromosomeA13:13543694..13544030 +
D13chromosomeD13:7455586..7455930 -
Ghir_A13chromosomeGhir_A13:14185996..14186332 +
Ghir_D13chromosomeGhir_D13:7467121..7467465 -
A13chromosomeA13:14456454..14456790 +
D13chromosomeD13:7289873..7290217 -
A13chromosomeA13:13838137..13838473 +
D13chromosomeD13:7689859..7690203 -
A13chromosomeA13:14498689..14499025 +
D13chromosomeD13:7348854..7349198 -
Gbar_A13chromosomeGbar_A13:14075496..14075832 +
Gbar_D13chromosomeGbar_D13:7103261..7103600 -
A13chromosomeA13:14247259..14247595 +
D13chromosomeD13:7063649..7063988 -
CM017622.1chromosomeCM017622.1:14388681..14389017 +
CM017635.1chromosomeCM017635.1:7331043..7331387 -
CM017648.1chromosomeCM017648.1:14918517..14918853 +
CM017661.1chromosomeCM017661.1:7784311..7784655 -
CM017700.1chromosomeCM017700.1:14152036..14152372 +
CM017713.1chromosomeCM017713.1:7332507..7332846 -
A13chromosomeA13:15083857..15084193 +
D13chromosomeD13:7857693..7858037 -
Chr13chromosomeChr13:9237488..9237824 -
Chr13chromosomeChr13:3622507..3622843 +
Chr13chromosomeChr13:6952777..6953122 -
B_13chromosomeB_13:86178525..86178865 +
Chr13chromosomeChr13:7444786..7445131 -
chr13chromosomechr13:6303173..6303518 -
Chr_13chromosomeChr_13:6672884..6673245 -
Chr13chromosomeChr13:7724079..7724424 -
Chr13chromosomeChr13:6752245..6752590 -
Chr13chromosomeChr13:4762445..4762790 -
Chr13chromosomeChr13:6825126..6825472 -
E13chromosomeE13:10658233..10658574 -
F13chromosomeF13:7992146..7992487 -
Chr13chromosomeChr13:159381875..159382231 +
Sequence
>PGML0136 ID=PGML0136; Name=PGML0136; organism=Gossypium raimondii; type=genetic_marker; length=346bp
CATCAAAGCTTAAACCAGAGGAAGTTATACAAGGCAATGTCAACACAACG
CAACGCAACGTCTAGTACATAGCAAAATAGATTGAACATAGTAACGAACG
GTTCATTTTAAGCAGCACTAACAACAAATTCAATATCTATGTGCCTATCA
AAACTGCCAAAATGACCCTCAGAAATCATGGACAGGTAAGGACTTATAAA
TTATAGGAACTCCTTTTTTTGGTGTGAACTCTGGGTATGCCCAAGTTACA
TTGGACTTGAAACTAATCCCAAACAGGCCAGGAGTGTTTAAAGTAAAACC
CTCTCAACAAGTGGGATCCAAACTTGTGTCCTCACCCTTATGGGAG