g.raimondii_cottongen_reftransV1_0001187, g.raimondii_cottongen_reftransV1_0001187 (contig) Gossypium raimondii
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2SE51_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 708.368 bits (1827), Expect = 0.000e+0 Identity = 368/452 (81.42%), Postives = 370/452 (81.86%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPI 1400 MGGETIIPPT TSEEEYSVDQDF LPSL+ S P L RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV P+ Sbjct: 1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVRKVPL 380 HSP 2 Score: 105.531 bits (262), Expect = 5.664e-21 Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1 Query: 1744 QVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE IVWHTIRHIW Sbjct: 374 NVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 424
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2P9X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 698.353 bits (1801), Expect = 0.000e+0 Identity = 367/468 (78.42%), Postives = 374/468 (79.91%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWV-----MENVCLAPIIM---AKMFCM 1424 MGGETIIPPT TSEEEYSVDQDF LPSL+ S P L RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP ENHDPVTELTIVDMLRYSLEHADRNLPYKNWV +C+ +++ + M CM Sbjct: 1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVRKVPLFSWLCVLAMLLGIASGMACM 396 HSP 2 Score: 105.531 bits (262), Expect = 6.034e-21 Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 1 Query: 1747 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE IVWHTIRHIW Sbjct: 371 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 420
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2SE54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0 Identity = 362/452 (80.09%), Postives = 364/452 (80.53%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPI 1400 MGGETIIPPT TSEEEYSVDQDF LPSL+ S P L RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV P+ Sbjct: 1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI------SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVRKVPL 374 HSP 2 Score: 105.531 bits (262), Expect = 5.716e-21 Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1 Query: 1744 QVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE IVWHTIRHIW Sbjct: 368 NVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 418
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0B0PDX2_GOSAR (Phosphate import ATP-binding PstB OS=Gossypium arboreum GN=F383_08353 PE=4 SV=1) HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0 Identity = 356/444 (80.18%), Postives = 362/444 (81.53%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVM 1376 MGGETIIPPTFTSEEEYSVDQDFSLPSLS S P L RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRS SLNEAKYKVLSYFPG WIENVGGKK SDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENIN++QNWMNNGVRHGEPVIRKSDDSSLRR+MKFKPREL WKFCRPQMVNFVIFVVDAVSVLKSIEG GVEDLLCLQMI+EVFK PCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP ENHDPVTELTIVDMLRYSLEHADRNLPYKNW++ Sbjct: 1 MGGETIIPPTFTSEEEYSVDQDFSLPSLS---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSMSLNEAKYKVLSYFPGIWIENVGGKKFSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINVVQNWMNNGVRHGEPVIRKSDDSSLRRRMKFKPRELGWKFCRPQMVNFVIFVVDAVSVLKSIEGHGVEDLLCLQMINEVFKHPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWLL 372 HSP 2 Score: 86.6557 bits (213), Expect = 9.809e-15 Identity = 52/92 (56.52%), Postives = 53/92 (57.61%), Query Frame = 3 Query: 1587 LLYPYCTCKAFLVIHDVYV*FLSGDTRFCASKHIAWLIVLLKTS**WL**SHAGSQSPSIFMVMCASNAAGYCLRNGLHAIFAYEASSEIRI 1862 LLYPY T KAFLVI DV C SQSPSIFMVMCASNAAG+CLRNGLHAIFAYEASSEIRI Sbjct: 371 LLYPYRTYKAFLVILDV-----------C-------------------------SQSPSIFMVMCASNAAGFCLRNGLHAIFAYEASSEIRI 426
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2SKV5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0 Identity = 334/373 (89.54%), Postives = 335/373 (89.81%), Query Frame = 3 Query: 282 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPI 1400 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV P+ Sbjct: 1 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVRKVPL 339 HSP 2 Score: 105.145 bits (261), Expect = 5.524e-21 Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1 Query: 1744 QVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE IVWHTIRHIW Sbjct: 333 NVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 383
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2P9X4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0 Identity = 343/389 (88.17%), Postives = 344/389 (88.43%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL 1211 MGGETIIPPT TSEEEYSVDQDF LPSL+ S P L RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL Sbjct: 1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL 351
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2TFT0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 331/377 (87.80%), Postives = 332/377 (88.06%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 1175 MGGETIIPPT TSEEEYSVDQDF LPSL+ S P L RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP Sbjct: 1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 339
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2QTK8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0 Identity = 325/377 (86.21%), Postives = 326/377 (86.47%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 1175 MGGETIIPPT TSEEEYSVDQDF LPSL+ S P L RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP Sbjct: 1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI------SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 333
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2TFS6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1) HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0 Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 3 Query: 282 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 1175 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP Sbjct: 1 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 298
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A061DLY3_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative OS=Theobroma cacao GN=TCM_046689 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 3.583e-164 Identity = 268/466 (57.51%), Postives = 303/466 (65.02%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQ--SSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFS 1436 MGGET+ PP FTSE+E SVDQDF P LF + ++ RD L MK + GK E DRL EEF ++ PQ S S +FEA KRR VYKEVL SY QL+VRS SLNE K KVLSY PG WIENVGG K SDYDVPKTT+LLLIGPKGCGKSSLVNKISRVFEDD FAP RAQ+S+N SVGDGT YLQ Y IPRGSASFCLYDSR L + TS+NINMI+ WM GVRH E V+RKS SSLRR+MK K RE WK C + VNFVIFVVD ++VLKS+EGDG ++ ++MI+ F P LSFKDDKP VVITHGDLLS+ADR R RV+LGELLGIPPAKQIFDIP E+ DP T LTIVDMLRYSLEHADRNLP KNWV + A + M +A+ + Sbjct: 1 MGGETMTPPNFTSEDEPSVDQDFP----------------LPSLFSQNPTLV----------------------RDDLGMKVDHGKKEVDRLLCEEFGQLAPQFSSYSLEFEADDKRRHNVYKEVLHSYCQLQVRSMSLNEVKSKVLSYVPGAWIENVGGMKSSDYDVPKTTALLLIGPKGCGKSSLVNKISRVFEDDKFAPARAQVSFNLSVGDGTCYLQEYTIPRGSASFCLYDSRSLCNDTSDNINMIKCWMTKGVRHEELVVRKSHQSSLRRRMKCKTRERSWKSCETRTVNFVIFVVDGITVLKSMEGDGPDETQYMEMITRAFMCPYLSFKDDKPAVVITHGDLLSLADRARVRVHLGELLGIPPAKQIFDIP----------------------------------ESDDPATALTIVDMLRYSLEHADRNLPRKNWVYKVFLSACTYLLAMLGIAIVA 394 The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09
Sequences
The
following sequences are available for this feature:
contig sequence >g.raimondii_cottongen_reftransV1_0001187 ID=g.raimondii_cottongen_reftransV1_0001187; Name=g.raimondii_cottongen_reftransV1_0001187; organism=Gossypium raimondii; type=contig; length=2100bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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