g.raimondii_cottongen_reftransV1_0001187, g.raimondii_cottongen_reftransV1_0001187 (contig) Gossypium raimondii

Overview
Nameg.raimondii_cottongen_reftransV1_0001187
Unique Nameg.raimondii_cottongen_reftransV1_0001187
Typecontig
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length2100
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr07chromosomeg.raimondii_cottongen_reftransV1_0001187:1..2100 .
Chr07:13603695..13606791 -
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2SE51_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 708.368 bits (1827), Expect = 0.000e+0
Identity = 368/452 (81.42%), Postives = 370/452 (81.86%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPI 1400
            MGGETIIPPT TSEEEYSVDQDF LPSL+         S  P L                              RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP                                  ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV   P+
Sbjct:    1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVRKVPL 380          

HSP 2 Score: 105.531 bits (262), Expect = 5.664e-21
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1
Query: 1744 QVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896
             VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE  IVWHTIRHIW
Sbjct:  374 NVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 424          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2P9X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 698.353 bits (1801), Expect = 0.000e+0
Identity = 367/468 (78.42%), Postives = 374/468 (79.91%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWV-----MENVCLAPIIM---AKMFCM 1424
            MGGETIIPPT TSEEEYSVDQDF LPSL+         S  P L                              RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP                                  ENHDPVTELTIVDMLRYSLEHADRNLPYKNWV        +C+  +++   + M CM
Sbjct:    1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVRKVPLFSWLCVLAMLLGIASGMACM 396          

HSP 2 Score: 105.531 bits (262), Expect = 6.034e-21
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 1
Query: 1747 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896
            VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE  IVWHTIRHIW
Sbjct:  371 VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 420          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2SE54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 362/452 (80.09%), Postives = 364/452 (80.53%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPI 1400
            MGGETIIPPT TSEEEYSVDQDF LPSL+         S  P L                              RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI      SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP                                  ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV   P+
Sbjct:    1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI------SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVRKVPL 374          

HSP 2 Score: 105.531 bits (262), Expect = 5.716e-21
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1
Query: 1744 QVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896
             VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE  IVWHTIRHIW
Sbjct:  368 NVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 418          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0B0PDX2_GOSAR (Phosphate import ATP-binding PstB OS=Gossypium arboreum GN=F383_08353 PE=4 SV=1)

HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0
Identity = 356/444 (80.18%), Postives = 362/444 (81.53%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVM 1376
            MGGETIIPPTFTSEEEYSVDQDFSLPSLS         S  P L                              RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRS SLNEAKYKVLSYFPG WIENVGGKK SDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENIN++QNWMNNGVRHGEPVIRKSDDSSLRR+MKFKPREL WKFCRPQMVNFVIFVVDAVSVLKSIEG GVEDLLCLQMI+EVFK PCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP                                  ENHDPVTELTIVDMLRYSLEHADRNLPYKNW++
Sbjct:    1 MGGETIIPPTFTSEEEYSVDQDFSLPSLS---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSMSLNEAKYKVLSYFPGIWIENVGGKKFSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINVVQNWMNNGVRHGEPVIRKSDDSSLRRRMKFKPRELGWKFCRPQMVNFVIFVVDAVSVLKSIEGHGVEDLLCLQMINEVFKHPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWLL 372          

HSP 2 Score: 86.6557 bits (213), Expect = 9.809e-15
Identity = 52/92 (56.52%), Postives = 53/92 (57.61%), Query Frame = 3
Query: 1587 LLYPYCTCKAFLVIHDVYV*FLSGDTRFCASKHIAWLIVLLKTS**WL**SHAGSQSPSIFMVMCASNAAGYCLRNGLHAIFAYEASSEIRI 1862
            LLYPY T KAFLVI DV           C                         SQSPSIFMVMCASNAAG+CLRNGLHAIFAYEASSEIRI
Sbjct:  371 LLYPYRTYKAFLVILDV-----------C-------------------------SQSPSIFMVMCASNAAGFCLRNGLHAIFAYEASSEIRI 426          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2SKV5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 334/373 (89.54%), Postives = 335/373 (89.81%), Query Frame = 3
Query:  282 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPI 1400
            MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP                                  ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV   P+
Sbjct:    1 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP----------------------------------ENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVRKVPL 339          

HSP 2 Score: 105.145 bits (261), Expect = 5.524e-21
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1
Query: 1744 QVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRKSEFKIVWHTIRHIW 1896
             VRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPR+SE  IVWHTIRHIW
Sbjct:  333 NVRKVPLFSWLCVLAMLLGIASGMACMRYLHMRHPRESELNIVWHTIRHIW 383          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2P9X4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 343/389 (88.17%), Postives = 344/389 (88.43%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL 1211
            MGGETIIPPT TSEEEYSVDQDF LPSL+         S  P L                              RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL
Sbjct:    1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL 351          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2TFT0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0
Identity = 331/377 (87.80%), Postives = 332/377 (88.06%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 1175
            MGGETIIPPT TSEEEYSVDQDF LPSL+         S  P L                              RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP
Sbjct:    1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 339          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2QTK8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0
Identity = 325/377 (86.21%), Postives = 326/377 (86.47%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 1175
            MGGETIIPPT TSEEEYSVDQDF LPSL+         S  P L                              RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI      SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP
Sbjct:    1 MGGETIIPPTSTSEEEYSVDQDFPLPSLT---------SLNPTLL-----------------------------RDYLRMKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVI------SLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 333          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A0D2TFS6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G157000 PE=4 SV=1)

HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 3
Query:  282 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 1175
            MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRV EDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP
Sbjct:    1 MKAEDGKNESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVLEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIP 298          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A061DLY3_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative OS=Theobroma cacao GN=TCM_046689 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 3.583e-164
Identity = 268/466 (57.51%), Postives = 303/466 (65.02%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGKNESDRLFLEEFDKMGPQ--SSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFS 1436
            MGGET+ PP FTSE+E SVDQDF                  P LF +   ++                      RD L MK + GK E DRL  EEF ++ PQ  S S +FEA  KRR  VYKEVL SY QL+VRS SLNE K KVLSY PG WIENVGG K SDYDVPKTT+LLLIGPKGCGKSSLVNKISRVFEDD FAP RAQ+S+N SVGDGT YLQ Y IPRGSASFCLYDSR L + TS+NINMI+ WM  GVRH E V+RKS  SSLRR+MK K RE  WK C  + VNFVIFVVD ++VLKS+EGDG ++   ++MI+  F  P LSFKDDKP VVITHGDLLS+ADR R RV+LGELLGIPPAKQIFDIP                                  E+ DP T LTIVDMLRYSLEHADRNLP KNWV +    A   +  M  +A+ +
Sbjct:    1 MGGETMTPPNFTSEDEPSVDQDFP----------------LPSLFSQNPTLV----------------------RDDLGMKVDHGKKEVDRLLCEEFGQLAPQFSSYSLEFEADDKRRHNVYKEVLHSYCQLQVRSMSLNEVKSKVLSYVPGAWIENVGGMKSSDYDVPKTTALLLIGPKGCGKSSLVNKISRVFEDDKFAPARAQVSFNLSVGDGTCYLQEYTIPRGSASFCLYDSRSLCNDTSDNINMIKCWMTKGVRHEELVVRKSHQSSLRRRMKCKTRERSWKSCETRTVNFVIFVVDGITVLKSMEGDGPDETQYMEMITRAFMCPYLSFKDDKPAVVITHGDLLSLADRARVRVHLGELLGIPPAKQIFDIP----------------------------------ESDDPATALTIVDMLRYSLEHADRNLPRKNWVYKVFLSACTYLLAMLGIAIVA 394          
The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2SE51_GOSRA5.664e-2181.42Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2P9X0_GOSRA6.034e-2178.42Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2SE54_GOSRA5.716e-2180.09Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0PDX2_GOSAR9.809e-1580.18Phosphate import ATP-binding PstB OS=Gossypium arb... [more]
A0A0D2SKV5_GOSRA5.524e-2189.54Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2P9X4_GOSRA0.000e+088.17Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TFT0_GOSRA0.000e+087.80Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2QTK8_GOSRA0.000e+086.21Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TFS6_GOSRA0.000e+099.66Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061DLY3_THECC3.583e-16457.51P-loop containing nucleoside triphosphate hydrolas... [more]

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BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 25..103
e-value: 6.4E-5
score: 21.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 215..288
e-value: 2.2E-8
score: 33.1
coord: 104..180
e-value: 2.2E-8
score: 33.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 191..288
coord: 90..163
NoneNo IPR availablePANTHERPTHR14241INTERFERON-INDUCED PROTEIN 44coord: 1..299
NoneNo IPR availablePANTHERPTHR14241:SF10VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN DDB_G0292188coord: 1..299

Sequences
The following sequences are available for this feature:

contig sequence

>g.raimondii_cottongen_reftransV1_0001187 ID=g.raimondii_cottongen_reftransV1_0001187; Name=g.raimondii_cottongen_reftransV1_0001187; organism=Gossypium raimondii; type=contig; length=2100bp
GGTTTTTTTCACCAGGGGATATAGTTTACTTTCTCCTGCAAAATATGGGT
GGTGAGACGATCATCCCTCCTACCTTCACTTCTGAGGAAGAATACTCAGT
AGACCAAGATTTCTCACTTCCATCATTGTCTTCCCTAAACCCCACTTTGC
TTAGGTACTCTTTTTTTCCCCCCCTGTTTTAAAGGATGAAATGAGTTTTA
GCCTATATAATTTTCTTGGGATCAAGTGAAAAATGTTGAATTTGATTATG
TGGTTTCATATGAGCAAGGGATTACTTGAGAATGAAGGCTGAAGATGGAA
AAAATGAAAGCGATAGGTTGTTTTTAGAAGAATTTGATAAGATGGGTCCT
CAGTCATCTTCTCCGGACTTTGAAGCTTATCACAAGAGGAGACAGAAGGT
TTACAAAGAGGTTTTGCAGAGTTATGATCAATTGCGGGTTCGAAGTAAGA
GTCTAAACGAGGCAAAGTACAAGGTTTTGAGTTATTTCCCAGGAACATGG
ATTGAGAATGTTGGTGGCAAGAAACTGAGTGATTACGATGTTCCAAAAAC
AACATCACTCCTTTTGATTGGTCCAAAAGGGTGTGGAAAAAGTAGTCTTG
TCAATAAAATTTCCAGGGTGTTTGAGGATGACAATTTTGCACCAGAACGT
GCTCAAATATCATATAATCCATCTGTTGGAGATGGGACCTACTATCTTCA
AGGATACATGATCCCAAGAGGTTCAGCTTCATTCTGTCTTTATGATTCCA
GGGGCTTGGCCGATGGCACCTCTGAAAACATTAATATGATTCAAAATTGG
ATGAATAATGGTGTTCGTCATGGGGAACCTGTTATCAGGAAATCTGATGA
TTCCAGTTTAAGGAGAAAAATGAAATTTAAACCACGAGAGCTAGATTGGA
AGTTCTGCAGGCCCCAGATGGTTAATTTTGTCATTTTTGTTGTTGATGCG
GTTTCTGTTTTGAAATCCATTGAGGGTGATGGCGTGGAAGACTTACTCTG
CTTGCAGATGATCAGCGAGGTTTTCAAGCAACCGTGCTTATCATTTAAAG
ATGATAAACCTGTTGTCGTTATCACACATGGAGATTTACTTTCAATTGCT
GACCGTGTTCGTGCCCGTGTTTATTTGGGAGAGCTGCTTGGTATTCCACC
TGCAAAACAAATTTTTGATATTCCAGGTGACTTCATCAAGTTATTTACAT
TTTCTGCTTTGTAATTTATTGATTACTTTTTGCCATCCCATTATTTATGC
AATTGAGTGTAAACCTTTAAGTTTGCAGAAAACCATGATCCAGTAACAGA
GTTGACAATTGTTGATATGCTGCGCTACTCACTTGAGCACGCAGATCGAA
ATCTTCCGTACAAGAACTGGGTAATGGAAAATGTATGTCTTGCACCAATA
ATAATGGCTAAGATGTTCTGCATGGCTGTATTTTCTTTTACTCTGATTTG
TAAAGCATGCTGATAACTTGTAAATGCTTGCTTCTTTGGCTTGGTTCATT
ATGCTTACAAAATTTCTTGGCAAGTGTTTTGCTCGAATCCAAAATATTTG
TTGTTATCATTACGCTTTGTCAAGCAAGTCATTTAGCTTTTGTATCCTTA
CTGTACTTGCAAGGCATTCTTAGTTATTCATGATGTCTATGTATGATTCC
TCAGTGGTGATACGAGGTTTTGCGCAAGCAAGCATATTGCTTGGTTGATT
GTTTTGTTAAAGACTTCTTAGTAATGGCTATAATGATCACATGCAGGTTC
GCAAAGTCCCTCTATTTTCATGGTTATGTGTGCTAGCAATGCTGCTGGGT
ATTGCCTCAGGAATGGCTTGCATGCGATATTTGCATATGAGGCATCCTCG
GAAATCAGAATTTAAGATAGTTTGGCATACAATCCGGCATATATGGTAAA
GATAAAATAAAGTTGGCTTTCTTTATTTGGTTTGATACCCTTCAACCCAG
TTCATAAACTACACGAATGCATTCTATACGAATGCATATGTAAATGGTTT
GATCTTTTTGATGTATGTGGAACTTAAGTTTATTGGAATAAAGCTTTGGT
ATTATTTGGGGGTTGACCTTTACAGCTTTGGTAGCCAGCGTTGATATCAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase