Garant

Germplasm Overview

Alias

Image


File Name	Legend	Dataset
SA-1727_CS12-2524_IMG_4467_L_1.jpg	[SA-1727] leaf, College Station Plot# 2523, 2012	NCGC digital imaging (College Station, 2012)
SA-1727_CS12-2524_MG_3275_LB_1.jpg	[SA-1727] leaf close up of the back surface, College Station Plot# 2524, 2012	NCGC digital imaging (College Station, 2012)
SA-1727_CS12-2524_MG_6120_F_1.jpg	[SA-1727] flower, College Station Plot# 2524, 2012	NCGC digital imaging (College Station, 2012)
SA-1727_CS12-2524_MG_6121_FO_1.jpg	[SA-1727] flower open, College Station Plot# 2524, 2012	NCGC digital imaging (College Station, 2012)
SA-1727_CS12-2524_MG_6746_B_1.jpg	[SA-1727] green boll, College Station Plot# 2524, 2012	NCGC digital imaging (College Station, 2012)
SA-1727_CS12-2524_MG_6747_BO_1.jpg	[SA-1727] boll open, College Station Plot# 2524, 2012	NCGC digital imaging (College Station, 2012)
SA-1727_CS12-2524_MG_6748_BN_1.jpg	[SA-1727] boll showing nectaries, College Station Plot# 2524, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 34 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, CS12	stem color	sun red	US_TX_CS_2012	2524
2	NCGC germplasm evaluation, CS12	stem gossypol glands	medium	US_TX_CS_2012	2524
3	NCGC germplasm evaluation, CS12	stigma exsertion	normal	US_TX_CS_2012	2524
4	NCGC germplasm evaluation, CS12	trichome density on leaf	moderate	US_TX_CS_2012	2524
5	NCGC germplasm evaluation, CS12	trichome density on stem	moderate	US_TX_CS_2012	2524
6	NCGC germplasm evaluation, CS12	plant height (m)	0.76	US_TX_CS_2012	2524
7	NCGC germplasm evaluation, CS12	leaf nectaries	one, main vein	US_TX_CS_2012	2524
8	NCGC germplasm evaluation, CS12	plot plant stand	1 plant	US_TX_CS_2012	2524
9	NCGC germplasm evaluation, CS12	productiveness	13-24 per plant	US_TX_CS_2012	2524

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl1227	genetic_marker	157\|185	bnl1227_157; bnl1227_185
2	NCGC_SNTD_SSR_genotype_2015	bnl1047	genetic_marker	150\|160	bnl1047_150; bnl1047_160
3	NCGC_SNTD_SSR_genotype_2015	tmb1356	genetic_marker	201\|238	tmb1356_201; tmb1356_238
4	NCGC_SNTD_SSR_genotype_2015	dpl0717	genetic_marker	230\|241	dpl0717_230; dpl0717_241

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_001796	T/G	T
2	TAMU_SNP63K_genotype	UCD_Gh_M_001800	G/A	G
3	TAMU_SNP63K_genotype	UCD_Gh_M_001827	T/C	T
4	TAMU_SNP63K_genotype	UCD_Gh_M_001859	G/A	G
5	TAMU_SNP63K_genotype	UCD_Gh_M_001895	C/A	A
6	TAMU_SNP63K_genotype	UCD_Gh_M_001903	A/C	C
7	TAMU_SNP63K_genotype	UCD_Gh_M_001911	T/C	T
8	TAMU_SNP63K_genotype	UCD_Gh_M_001912	C/T	C
9	TAMU_SNP63K_genotype	UCD_Gh_M_001913	C/T	C
10	TAMU_SNP63K_genotype	UCD_Gh_M_001953	C/T	C
11	TAMU_SNP63K_genotype	UCD_Gh_M_001968	G/A	R
12	TAMU_SNP63K_genotype	UCD_Gh_M_002000	C/T	T
13	TAMU_SNP63K_genotype	UCD_Gh_M_002001	G/T	T
14	TAMU_SNP63K_genotype	UCD_Gh_M_002016	A/G	G
15	TAMU_SNP63K_genotype	UCD_Gh_M_002022	C/T	T
16	TAMU_SNP63K_genotype	UCD_Gh_M_002026	G/A	G
17	TAMU_SNP63K_genotype	UCD_Gh_M_002041	T/C	C
18	TAMU_SNP63K_genotype	UCD_Gh_M_002072	A/G	A
19	TAMU_SNP63K_genotype	UCD_Gh_M_002110	A/C	M
20	TAMU_SNP63K_genotype	UCD_Gh_M_002112	G/T	T
21	TAMU_SNP63K_genotype	UCD_Gh_M_002119	A/G	A
22	TAMU_SNP63K_genotype	UCD_Gh_M_002139	C/T	C
23	TAMU_SNP63K_genotype	UCD_Gh_M_002149	A/C	M
24	TAMU_SNP63K_genotype	UCD_Gh_M_002190	G/A	A
25	TAMU_SNP63K_genotype	UCD_Gh_M_002191	C/T	C

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Cross References

External references for this accession


Database	Accession
GRIN	PI 532792

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 532792	GRIN:

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