Aleppo I (PI 529450)

Germplasm Overview

Alias

Image


File Name	Legend	Dataset
SA-1395_CS13-0722_IMG_3433_BN.jpg	[SA-1395] boll showing nectaries, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)
SA-1395_CS13-0722_IMG_3434_B.jpg	[SA-1395] green boll, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)
SA-1395_CS13-0722_IMG_3435_B.jpg	[SA-1395] green boll, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)
SA-1395_CS13-0722_IMG_3436_BO.jpg	[SA-1395] boll open, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)
SA-1395_CS13-0722_IMG_7587_F.jpg	[SA-1395] flower, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)
SA-1395_CS13-0722_IMG_7588_LB.jpg	[SA-1395] leaf close up of the back surface, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)
SA-1395_CS13-0722_IMG_7589_FO.jpg	[SA-1395] flower open, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)
SA-1395_CS13-0722_MG_9152_L.jpg	[SA-1395] leaf, College Station Plot-0722, 2013	NCGC digital imaging (College Station, 2013)

Phenotypic Data

Total 43 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, CS13	lint color	white	US_TX_CS_2013	722
2	NCGC germplasm evaluation, CS13	petal color	cream	US_TX_CS_2013	722
3	NCGC germplasm evaluation, CS13	petal spot	none	US_TX_CS_2013	722
4	NCGC germplasm evaluation, CS13	photoperiod	open bolls	US_TX_CS_2013	722
5	NCGC germplasm evaluation, CS13	plant shape	normal	US_TX_CS_2013	722
6	NCGC germplasm evaluation, CS13	plot maturity	less than half open	US_TX_CS_2013	722
7	NCGC germplasm evaluation, CS13	population homogeneity	uniform	US_TX_CS_2013	722
8	NCGC germplasm evaluation, CS13	seed fuzz grade	high	US_TX_CS_2013	722
9	NCGC germplasm evaluation, CS13	seed type	free	US_TX_CS_2013	722
10	NCGC germplasm evaluation, CS13	stem color	sun red	US_TX_CS_2013	722
11	NCGC germplasm evaluation, CS13	stem gossypol glands	medium	US_TX_CS_2013	722
12	NCGC germplasm evaluation, CS13	stigma exsertion	normal	US_TX_CS_2013	722
13	NCGC germplasm evaluation, CS13	trichome density on leaf	moderate	US_TX_CS_2013	722
14	NCGC germplasm evaluation, CS13	trichome density on stem	moderate	US_TX_CS_2013	722
15	NCGC germplasm evaluation, CS13	plant height (m)	1.07	US_TX_CS_2013	722
16	NCGC germplasm evaluation, CS13	leaf nectaries	one, main vein	US_TX_CS_2013	722
17	NCGC germplasm evaluation, CS13	plot plant stand	1 plant	US_TX_CS_2013	722
18	NCGC germplasm evaluation, CS13	productiveness	25-36 per plant	US_TX_CS_2013	722

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl1227	genetic_marker	157\|185	bnl1227_157; bnl1227_185
2	NCGC_SNTD_SSR_genotype_2015	bnl1047	genetic_marker	150\|160	bnl1047_150; bnl1047_160
3	NCGC_SNTD_SSR_genotype_2015	tmb1356	genetic_marker	201\|238	tmb1356_201; tmb1356_238
4	NCGC_SNTD_SSR_genotype_2015	dpl0717	genetic_marker	230\|241	dpl0717_230; dpl0717_241

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_000098	G/A	G
2	TAMU_SNP63K_genotype	UCD_Gh_M_000099	A/G	G
3	TAMU_SNP63K_genotype	UCD_Gh_M_000120	A/G	A
4	TAMU_SNP63K_genotype	UCD_Gh_M_000122	T/C	C
5	TAMU_SNP63K_genotype	UCD_Gh_M_000143	C/T	C
6	TAMU_SNP63K_genotype	UCD_Gh_M_000150	A/G	G
7	TAMU_SNP63K_genotype	UCD_Gh_M_000169	C/A	C
8	TAMU_SNP63K_genotype	UCD_Gh_M_000184	A/G	R
9	TAMU_SNP63K_genotype	UCD_Gh_M_000196	G/A	G
10	TAMU_SNP63K_genotype	UCD_Gh_M_000198	C/T	T
11	TAMU_SNP63K_genotype	UCD_Gh_M_000204	G/A	G
12	TAMU_SNP63K_genotype	UCD_Gh_M_000212	A/G	A
13	TAMU_SNP63K_genotype	UCD_Gh_M_000213	G/A	G
14	TAMU_SNP63K_genotype	UCD_Gh_M_000220	A/C	A
15	TAMU_SNP63K_genotype	UCD_Gh_M_000230	C/T	T
16	TAMU_SNP63K_genotype	UCD_Gh_M_000232	G/A	A
17	TAMU_SNP63K_genotype	UCD_Gh_M_000238	A/C	A
18	TAMU_SNP63K_genotype	UCD_Gh_M_000248	T/C	T
19	TAMU_SNP63K_genotype	UCD_Gh_M_000249	A/G	A
20	TAMU_SNP63K_genotype	UCD_Gh_M_000250	G/A	A
21	TAMU_SNP63K_genotype	UCD_Gh_M_000273	A/G	A
22	TAMU_SNP63K_genotype	UCD_Gh_M_000275	T/C	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000276	A/C	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000287	G/T	T
25	TAMU_SNP63K_genotype	UCD_Gh_M_000296	A/C	C

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Cross References

External references for this accession


Database	Accession
GRIN	PI 529450

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 529450	GRIN:

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