Lisina 11

Germplasm Overview

Alias

Image


File Name	Legend	Dataset
SA-1234_CS12-2129_IMG_4243_L.jpg	[SA-1234] leaf, College Station Plot# 2128, 2012	NCGC digital imaging (College Station, 2012)
SA-1234_CS12-2129_MG_3054_LB.jpg	[SA-1234] leaf close up of the back surface, College Station Plot# 2129, 2012	NCGC digital imaging (College Station, 2012)
SA-1234_CS12-2129_MG_3935_F.jpg	[SA-1234] flower, College Station Plot# 2129, 2012	NCGC digital imaging (College Station, 2012)
SA-1234_CS12-2129_MG_3936_FO.jpg	[SA-1234] flower open, College Station Plot# 2129, 2012	NCGC digital imaging (College Station, 2012)
SA-1234_CS12-2129_MG_6340_B.jpg	[SA-1234] green boll, College Station Plot# 2129, 2012	NCGC digital imaging (College Station, 2012)
SA-1234_CS12-2129_MG_6341_BO.jpg	[SA-1234] boll open, College Station Plot# 2129, 2012	NCGC digital imaging (College Station, 2012)
SA-1234_CS12-2129_MG_6342_BN.jpg	[SA-1234] boll showing nectaries, College Station Plot# 2129, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 35 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, CS12	population homogeneity	uniform	US_TX_CS_2012	2129
2	NCGC germplasm evaluation, CS12	seed fuzz grade	sparse	US_TX_CS_2012	2129
3	NCGC germplasm evaluation, CS12	stem color	sun red	US_TX_CS_2012	2129
4	NCGC germplasm evaluation, CS12	stem gossypol glands	heavy	US_TX_CS_2012	2129
5	NCGC germplasm evaluation, CS12	trichome density on leaf	moderate	US_TX_CS_2012	2129
6	NCGC germplasm evaluation, CS12	trichome density on stem	moderate	US_TX_CS_2012	2129
7	NCGC germplasm evaluation, CS12	plant height (m)	1.07	US_TX_CS_2012	2129
8	NCGC germplasm evaluation, CS12	leaf nectaries	one, main vein	US_TX_CS_2012	2129
9	NCGC germplasm evaluation, CS12	plot plant stand	0.75	US_TX_CS_2012	2129
10	NCGC germplasm evaluation, CS12	productiveness	13-24 per plant	US_TX_CS_2012	2129

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl1227	genetic_marker	157\|173\|185	bnl1227_157; bnl1227_173; bnl1227_185
2	NCGC_SNTD_SSR_genotype_2015	bnl1047	genetic_marker	150\|160	bnl1047_150; bnl1047_160
3	NCGC_SNTD_SSR_genotype_2015	tmb1356	genetic_marker	201\|238	tmb1356_201; tmb1356_238
4	NCGC_SNTD_SSR_genotype_2015	dpl0717	genetic_marker	230\|241	dpl0717_230; dpl0717_241

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_004029	G/A	G
2	TAMU_SNP63K_genotype	UCD_Gh_M_004068	T/G	G
3	TAMU_SNP63K_genotype	UCD_Gh_M_004069	A/G	G
4	TAMU_SNP63K_genotype	UCD_Gh_M_004070	C/A	A
5	TAMU_SNP63K_genotype	UCD_Gh_M_004089	A/G	A
6	TAMU_SNP63K_genotype	UCD_Gh_M_004090	C/T	C
7	TAMU_SNP63K_genotype	UCD_Gh_M_004155	T/C	T
8	TAMU_SNP63K_genotype	UCD_Gh_M_004176	A/G	A
9	TAMU_SNP63K_genotype	UCD_Gh_M_004177	A/C	A
10	TAMU_SNP63K_genotype	UCD_Gh_M_004181	T/C	C
11	TAMU_SNP63K_genotype	UCD_Gh_M_004195	G/A	G
12	TAMU_SNP63K_genotype	UCD_Gh_M_004305	A/C	A
13	TAMU_SNP63K_genotype	UCD_Gh_M_004347	A/C	A
14	TAMU_SNP63K_genotype	UCD_Gh_M_004360	A/G	R
15	TAMU_SNP63K_genotype	UCD_Gh_M_004366	C/T	T
16	TAMU_SNP63K_genotype	UCD_Gh_M_004386	G/T	T
17	TAMU_SNP63K_genotype	UCD_Gh_M_004433	G/T	T
18	TAMU_SNP63K_genotype	UCD_Gh_M_004450	T/C	T
19	TAMU_SNP63K_genotype	UCD_Gh_M_004452	C/T	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_004463	C/T	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_004478	T/C	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_004488	A/G	G
23	TAMU_SNP63K_genotype	UCD_Gh_M_004525	T/C	T
24	TAMU_SNP63K_genotype	UCD_Gh_M_004551	A/C	C
25	TAMU_SNP63K_genotype	UCD_Gh_M_004555	C/T	C

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Cross References

External references for this accession


Database	Accession
GRIN	PI 365529
GRIN	PI 529297

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 365529; PI 529297	GRIN: ; GRIN:

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