EVM_prediction_Ga07G2173, evm.TU.Ga07G2173_CRI-A2_v1.0.a1 (gene) Gossypium arboreum

Gene Overview


Name	EVM_prediction_Ga07G2173
Unique Name	evm.TU.Ga07G2173_CRI-A2_v1.0.a1
Type	gene
Organism	Gossypium arboreum (Tree cotton)
Sequence length	3552

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr07_CRI-A2_v1.0.a1	chromosome	Chr07_CRI-A2_v1.0.a1:87797574..87801125 -	Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1	n/a

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1	2019-02-17

Publications


Year	Publication
2018	Du X, Huang G, He S, Yang Z, Sun G, Ma X, Li N, Zhang X, Sun J, Liu M, Jia Y, Pan Z, Gong W, Liu Z, Zhu H, Ma L, Liu F, Yang D, Wang F, Fan W, Gong Q, Peng Z, Wang L, Wang X, Xu S, Shang H, Lu C, Zheng H, Huang S, Lin T, Zhu Y, Li F. Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits. Nature genetics. 2018 May 07.

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EVM_prediction_Ga07G2173	evm.model.Ga07G2173_CRI-A2_v1.0.a1	Gossypium arboreum	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
gene from alignment at Chr07_CRI-A2_v1.0.a1:87797574..87801125-

gene sequence

>evm.TU.Ga07G2173_CRI-A2_v1.0.a1 ID=evm.TU.Ga07G2173_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga07G2173; organism=Gossypium arboreum; type=gene; length=3552bp
ATGGAGTTTTGGGGTAAGCTCCTCTCTTGCGTTTCATTTTTGATGCTTTG
GGCTTTTCCTTTTCATTTCTCGTCTTCTTTTGTGTTGCTCAATGTCTTGT
TTTATTTGAACATTTTTACTTATTTCCTTCGATTTTGTTTTTGTTTTGGT
TTAACCTTCTTTTGTCGTTCAAAGTTGGTAGTTTTGAAGGAAGCTGTGAT
CTTTTTTCTTCTATTGTGATGATATTATCTTTTTCCTTGGACTTTAATGT
TTGTAATGCATTTTTCGGCTTACTTTGTTTGATAGAGTGAATGGATTTGC
TGATTTGTAGTTATTTAGTTTGGACCAATAAATTTAATCATCTTGTTATC
TTAGTATTAGGTATTGAAGTTAAGTCTGGACAGCCTATTAAAGCAGATCC
TGGTGCTAACTACGTTATCCATCTTTCCCAGGTTAGAAGTTATTCAATAG
TTGAAGTTGACATTTTTTTAATTTATGGTTGCTTTCTTTTTAGTTCTTTT
TTTATACACTAACGTGGTCTGCAATGTAATGCTGCTTGTGTCTTATGCTT
CACTTGGAGAGTCCAAGAACAAAGCAGAATCCGTTCCACTCTATGTGAAT
GTTGATGGGAAGAAACTTATTCTGGGAACCCTTTCCCACCAGAGTTGCCC
TCAATTATCTTTTGATTTAGTGTTTGACGAAGAGTTTGAGCTCTCCCACA
ACTGGAAAAACGGGAGCGTATATTTCCTCGGTTACAAAACTTTCATACCA
GAGGAAGGATATCCTTTTATCAATACCTATTAATTTACTATTTTTAGTGA
TAACTACGCTTTTTTTAATGAGTGTTTAGCGTGCTTGTTCAATCTTATGC
TTCCTTGACTCTTAATGCCTGTTTTCTGTCCCCACTGATGATTTTGGTAA
GGCCTTGTATAAATTTGATCCCACATGCATTTTATTTTTTCGGTTTTTGA
AGTATTTCTCATGCATGTTATTCTTATTTATAGGTATGTCTAGCGAAGAA
GAAAGCAAGGAGGAGGAAGAGGAGGAACTTCCTGTCGCTGCTGCTGCTGC
AGTAAATGGTAAACTCTTCTTTTCCAGCGAGATCTATAGTTATTGTTGAA
GATTATATTATTTTGCATTTTAAATGTTTGGTGTATTCATACATTCTAGG
AAAGGCTATGCTAGATGCAAAAACAGCCAAGGCTAATGCTGGGAAACCTG
ATGCTGTTAAACAATCTGGGAAGATAGCAGAACCTAGCAATAACAAGAAA
TCTGAGGATGAAGATGATGATGATGAGTCCGAGGATGAGAGTGGTTCTGA
TGAGGAAGATGATTCTGATGATGATGACGAGTTTGATGAGGTTTTTTTTC
ATAACTAAGCTTATAATTTTAATTCATTCATTTTTGTAATGTATGGCTTA
TTTTCAGTGTTAGTGAAATTTGAATTGTTTATTTTTCTTGACAGATGTCT
ATAGATGAAAGTTCAGATGACGAGGATAACGAGACACCTAAGAAGGTATC
TTCTTATTCTTTGTTAGGTAGCAACTGTTGAATTTGACCCAATTCTATGT
TATAATTTGTCTCTTTTGGCTTCTAGGTCGAGTCAAGCAATAAGAGACCT
GCTGAAGCTGCAACCCCTGCTTCTGCAAAAAAGGCTAAATCTGCAGTTAC
ACCTCAGAAGACAGGTCGTTTTTATTGTTCACTTGAAGTCATTATTTCTG
CCACTTCATAGGATGTCTGCGTATATTTTGGTTAACCAATGATTTGCTTG
TTCATATCCCTGTGATCTGATTATAGTTCCTTTGCAGATGGTAAGAAGGG
TGGACACACCGCATCCAGCAAAGCAATCTGGGAAAAATTCTGCAAAGTCT
CTAAAGCAATGCCTGGCAAGCGCTTCTATGACTTCTCTGAGATTCGCAGG
GAGATTCAGGTTCTGTCTTGCTTGTTATGATTGAGAAGAGCAGAAGTTAG
CAATTTTATTATCATTTTCCCCTTTTCAAACTGCTTTTAAGGTTTATTAG
AATTGTAAGATAAAACATTGAAGCGAGAAACATTTTCATTGGGTGACATT
TGAATTTTCTGGTTTCTAGAGGTGCCTCTGCTATTTTTTGCTTTCACATA
AAATCCTTTGGGTTATAGAAGAAAGATACCCAATTTCCATAGGCTTTAGG
TGGATAGTCACAGTGAGTGAAAAATACAACCTCTTAATTTCCATAGGCAT
TTCTTTGTGTGTGTAGGTGCGTATGTTTAAATACTAAAAAATGAAAAATG
TCTGAAGTTTCAATTAATTGCAGGCTGAGACGGATAGGGATGCTGGAGGA
AACAAAGGTGTTTCTGACAAGCAGATTCGACTTAAGATTTTCTCACCAAA
TGTTCTTGATATCACTCTCATGGATTTGCCTGGAATCACAAAGGTTACTG
TGGGTGACCAGCCCTCTGACATTGAAGCTCGAATAAGAACAATGATCATG
TCATACATTAAACAGCCAAGCTGTCTGATTATAGCTGTTACTCCTGCAAA
TTCTGACTTAGCAAATTTTGATGCGCTTCAAATTGCTGGAAATGCTGATC
TTGATGGTAAATTATATGATCAAAATCCCAATTTCTGCATTCGAGTTACT
GTTTATATTATCTCAAACATTCCTTCTTTCATAAAATATTTGCTTTCATA
AACATTCCTGCATTCGACTTAGCAAATTCGAGTTGCTGAACGTTGTGGTG
TACCTCAGTTGGCGAAGAAGCTGAACCAGGTAAAATATTTGCAAGATGAA
GTTTTCATAAACTTTATGGAATATAACTCAATTTCACATGTCAATGCTTT
GTTCTAGTTATAAATATTCAGCTGCCTATGAACCTTTTGCTACTTTGCCC
TCACTTCATATAAATATTTACATATCCTGTCCGTGTATTTATTCCCCCTG
TTTATGCTACACATTTGGTGGGGAAAAAAAATCTCGATCAACTTCCAACT
AGATTAGAACATGAACCTATTATGAACTTTGGATCGTTACAGCCTACCTA
GATCAATACTATGCATGCTTATTTATATTATCTCAAACATTCCTGCTTTC
AGTGTACCTTTTACCTGAATCAAGTCGCCTCCATGCTCATAAGATTTGTT
GAAGGGTGGTTCATCACATCATTGTACAAAGTTGGTCATCAGTTAATTAT
TAATATTGACATCATTGTACAAACCGTTGGTCATTAGTTACTATCTTTTA
TCATTAATATTTCTGTTGTTTCTAGTGATGAGTGCATTTTACTCCCCAAT
GTGATTGTGCACAAGTTGTCTGCAAGGACAGGATGCTTAAAATAAAGATG
ACAAAACCTGATCAATATAAGTAATTATCTGGTTTCATGATGTTAATTTC
TCACCTTTCCTTTTTTCTGGCAATAAAATAGAACTTTCTAACTTTTGTCA
TGGCACTGTTTCATGTAAAACACAGACATTAGTTTTACATTGCAACTCTA
GAATTGCTTAGACGTGCCTCTGAACAAGAGCCTTTATGTAAATACTTTTT
CCTGATGCTGGTTTTGAGTTTGCGGTTAACTGATTTTTGTACAGGAGGTT
GA

gene from alignment at Chr07_CRI-A2_v1.0.a1:87797574..87801125-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>evm.TU.Ga07G2173_CRI-A2_v1.0.a1 ID=evm.TU.Ga07G2173_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga07G2173; organism=Gossypium arboreum; type=gene; length=3552bp; location=Sequence derived from: Chr07_CRI-A2_v1.0.a1:87797574..87801125- (Gossypium arboreum
ATGGAGTTTTGGGGTAAGCTCCTCTCTTGCGTTTCATTTTTGATGCTTTG
GGCTTTTCCTTTTCATTTCTCGTCTTCTTTTGTGTTGCTCAATGTCTTGT
TTTATTTGAACATTTTTACTTATTTCCTTCGATTTTGTTTTTGTTTTGGT
TTAACCTTCTTTTGTCGTTCAAAGTTGGTAGTTTTGAAGGAAGCTGTGAT
CTTTTTTCTTCTATTGTGATGATATTATCTTTTTCCTTGGACTTTAATGT
TTGTAATGCATTTTTCGGCTTACTTTGTTTGATAGAGTGAATGGATTTGC
TGATTTGTAGTTATTTAGTTTGGACCAATAAATTTAATCATCTTGTTATC
TTAGTATTAGGTATTGAAGTTAAGTCTGGACAGCCTATTAAAGCAGATCC
TGGTGCTAACTACGTTATCCATCTTTCCCAGGTTAGAAGTTATTCAATAG
TTGAAGTTGACATTTTTTTAATTTATGGTTGCTTTCTTTTTAGTTCTTTT
TTTATACACTAACGTGGTCTGCAATGTAATGCTGCTTGTGTCTTATGCTT
CACTTGGAGAGTCCAAGAACAAAGCAGAATCCGTTCCACTCTATGTGAAT
GTTGATGGGAAGAAACTTATTCTGGGAACCCTTTCCCACCAGAGTTGCCC
TCAATTATCTTTTGATTTAGTGTTTGACGAAGAGTTTGAGCTCTCCCACA
ACTGGAAAAACGGGAGCGTATATTTCCTCGGTTACAAAACTTTCATACCA
GAGGAAGGATATCCTTTTATCAATACCTATTAATTTACTATTTTTAGTGA
TAACTACGCTTTTTTTAATGAGTGTTTAGCGTGCTTGTTCAATCTTATGC
TTCCTTGACTCTTAATGCCTGTTTTCTGTCCCCACTGATGATTTTGGTAA
GGCCTTGTATAAATTTGATCCCACATGCATTTTATTTTTTCGGTTTTTGA
AGTATTTCTCATGCATGTTATTCTTATTTATAGGTATGTCTAGCGAAGAA
GAAAGCAAGGAGGAGGAAGAGGAGGAACTTCCTGTCGCTGCTGCTGCTGC
AGTAAATGGTAAACTCTTCTTTTCCAGCGAGATCTATAGTTATTGTTGAA
GATTATATTATTTTGCATTTTAAATGTTTGGTGTATTCATACATTCTAGG
AAAGGCTATGCTAGATGCAAAAACAGCCAAGGCTAATGCTGGGAAACCTG
ATGCTGTTAAACAATCTGGGAAGATAGCAGAACCTAGCAATAACAAGAAA
TCTGAGGATGAAGATGATGATGATGAGTCCGAGGATGAGAGTGGTTCTGA
TGAGGAAGATGATTCTGATGATGATGACGAGTTTGATGAGGTTTTTTTTC
ATAACTAAGCTTATAATTTTAATTCATTCATTTTTGTAATGTATGGCTTA
TTTTCAGTGTTAGTGAAATTTGAATTGTTTATTTTTCTTGACAGATGTCT
ATAGATGAAAGTTCAGATGACGAGGATAACGAGACACCTAAGAAGGTATC
TTCTTATTCTTTGTTAGGTAGCAACTGTTGAATTTGACCCAATTCTATGT
TATAATTTGTCTCTTTTGGCTTCTAGGTCGAGTCAAGCAATAAGAGACCT
GCTGAAGCTGCAACCCCTGCTTCTGCAAAAAAGGCTAAATCTGCAGTTAC
ACCTCAGAAGACAGGTCGTTTTTATTGTTCACTTGAAGTCATTATTTCTG
CCACTTCATAGGATGTCTGCGTATATTTTGGTTAACCAATGATTTGCTTG
TTCATATCCCTGTGATCTGATTATAGTTCCTTTGCAGATGGTAAGAAGGG
TGGACACACCGCATCCAGCAAAGCAATCTGGGAAAAATTCTGCAAAGTCT
CTAAAGCAATGCCTGGCAAGCGCTTCTATGACTTCTCTGAGATTCGCAGG
GAGATTCAGGTTCTGTCTTGCTTGTTATGATTGAGAAGAGCAGAAGTTAG
CAATTTTATTATCATTTTCCCCTTTTCAAACTGCTTTTAAGGTTTATTAG
AATTGTAAGATAAAACATTGAAGCGAGAAACATTTTCATTGGGTGACATT
TGAATTTTCTGGTTTCTAGAGGTGCCTCTGCTATTTTTTGCTTTCACATA
AAATCCTTTGGGTTATAGAAGAAAGATACCCAATTTCCATAGGCTTTAGG
TGGATAGTCACAGTGAGTGAAAAATACAACCTCTTAATTTCCATAGGCAT
TTCTTTGTGTGTGTAGGTGCGTATGTTTAAATACTAAAAAATGAAAAATG
TCTGAAGTTTCAATTAATTGCAGGCTGAGACGGATAGGGATGCTGGAGGA
AACAAAGGTGTTTCTGACAAGCAGATTCGACTTAAGATTTTCTCACCAAA
TGTTCTTGATATCACTCTCATGGATTTGCCTGGAATCACAAAGGTTACTG
TGGGTGACCAGCCCTCTGACATTGAAGCTCGAATAAGAACAATGATCATG
TCATACATTAAACAGCCAAGCTGTCTGATTATAGCTGTTACTCCTGCAAA
TTCTGACTTAGCAAATTTTGATGCGCTTCAAATTGCTGGAAATGCTGATC
TTGATGGTAAATTATATGATCAAAATCCCAATTTCTGCATTCGAGTTACT
GTTTATATTATCTCAAACATTCCTTCTTTCATAAAATATTTGCTTTCATA
AACATTCCTGCATTCGACTTAGCAAATTCGAGTTGCTGAACGTTGTGGTG
TACCTCAGTTGGCGAAGAAGCTGAACCAGGTAAAATATTTGCAAGATGAA
GTTTTCATAAACTTTATGGAATATAACTCAATTTCACATGTCAATGCTTT
GTTCTAGTTATAAATATTCAGCTGCCTATGAACCTTTTGCTACTTTGCCC
TCACTTCATATAAATATTTACATATCCTGTCCGTGTATTTATTCCCCCTG
TTTATGCTACACATTTGGTGGGGAAAAAAAATCTCGATCAACTTCCAACT
AGATTAGAACATGAACCTATTATGAACTTTGGATCGTTACAGCCTACCTA
GATCAATACTATGCATGCTTATTTATATTATCTCAAACATTCCTGCTTTC
AGTGTACCTTTTACCTGAATCAAGTCGCCTCCATGCTCATAAGATTTGTT
GAAGGGTGGTTCATCACATCATTGTACAAAGTTGGTCATCAGTTAATTAT
TAATATTGACATCATTGTACAAACCGTTGGTCATTAGTTACTATCTTTTA
TCATTAATATTTCTGTTGTTTCTAGTGATGAGTGCATTTTACTCCCCAAT
GTGATTGTGCACAAGTTGTCTGCAAGGACAGGATGCTTAAAATAAAGATG
ACAAAACCTGATCAATATAAGTAATTATCTGGTTTCATGATGTTAATTTC
TCACCTTTCCTTTTTTCTGGCAATAAAATAGAACTTTCTAACTTTTGTCA
TGGCACTGTTTCATGTAAAACACAGACATTAGTTTTACATTGCAACTCTA
GAATTGCTTAGACGTGCCTCTGAACAAGAGCCTTTATGTAAATACTTTTT
CCTGATGCTGGTTTTGAGTTTGCGGTTAACTGATTTTTGTACAGGAGGTT
GA

Search form

EVM_prediction_Ga07G2173, evm.TU.Ga07G2173_CRI-A2_v1.0.a1 (gene) Gossypium arboreum