DPL0094

Marker Overview
NameDPL0094
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDelta Opal
Source SequenceDPL0094_orig
Source Typegenomic
Repeat Motif(AG)29
PCR ConditionAnnealing temperature: 55
Primer 1DPL0094_F: CCCAAACCACATTCATTTCG
Primer 2DPL0094_R: AGATGTCTGTGATGAGTTTGGAGA
PolymorphismP_ DPL0094
ContactFang, David D.
CommentPrimer data obtained in 2007-05
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD-genome wide Reference Map (2009).Ref-chr01N/AAD_chr.0191DPL0094View
2Emian-22 x 3-79, BC1 (2011)Emian-22 x 3-79, BC1 (2011).E3-BC1_chr01N/AAD_chr.0130.6DPL0094View
3TM-1 x 3-79, RIL (2014)T3-RIL.14_chr01N/AAD_chr.0195.7DPL0094View
4CCRI 12-4 x (AD)5-7, F2 (2015)CAD5-F2_chr01N/AAt.0196.1DPL0094View
5CCRI-35 x Yumian-1, RIL (2015)CY-RIL_chr01N/AAD_chr.01138DPL0094View
6TM-1 x 3-79, RIL (2012)TM-1 x 3-79, RIL (2012).T3-RIL.12_c01N/AAD_chr.0148.67DPL094View
7CCRI-35 x Yumian-1, RIL (2017)CY-RIL.17_chr01N/AAt.0120.78DPL0094-20.783View
8TM-1 x 3-79, RIL (2012.v3)T3-RIL.12v3_chr.01N/AAD_chr.0195.71DPL0094-95.711View
9PD 94042 x (AD)4-08, F2 (2016)PA-F2_chr01N/AAt.0141.3DPL0094-41.3View
Contact
NameDetails
Fang, David D.
Description:Molecular markers, fiber development
First name:David
Last name:Fang
Title:Supervisory Research Geneticist
Institution:USDA-ARS-SRRC-CFBRU
Address:1100 Robert E. Lee Blvd, New Orleans, LA 70124
Country:United States
Email:david.fang@ars.usda.gov
Phone:504 286 4527
Fax:001662686-5218
Keywords:Structural Genomics
Last update:2-Jul-2009
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
DPL0094_FDPL0094_FGossypium hirsutumprimer
DPL0094_RDPL0094_RGossypium hirsutumprimer


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
DPL0094DPL0094Gossypium hirsutummarker_locus
DPL094DPL094Gossypium hirsutummarker_locus
DPL0094DPL0094-20.783Gossypium hirsutummarker_locus
DPL0094DPL0094-95.711Gossypium hirsutummarker_locus
DPL0094DPL0094-41.3Gossypium hirsutummarker_locus


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DPL0094_origDPL0094_origGossypium hirsutumsequence_feature


Germplasm
Stock NameType
Delta OpalTBD
Sequence
>DPL0094 ID=DPL0094|Name=DPL0094|organism=Gossypium hirsutum|type=genetic_marker|length=246bp
CCCAAACCACATTCATTTCGATAAACATACTTCATGAAACTGTACAAAAC
CATGCAAATTGCAATGCAGAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAAAAAGGGTAGATATAA
TCATATACCGAGATTTGTGTCATGGCTGGTTCAACTGGCTTGAAATCCTG
ATGAACAAATGCATTGCATTCATCTCCAAACTCATCACAGACATCT