HS-46 x MARCABUCAG8US-1-88, RIL (2016)

Map Overview

Click on any linkage group to explore this map further. You will be taken to MapViewer and leave this page.

NameHS-46 x MARCABUCAG8US-1-88, RIL (2016)
SpeciesGossypium hirsutum
Analysis methodinclusive composite interval mapping
SoftwareJoinMap 4.0
Map typegenetic
Population typeRIL
Population size188
Genome groupAD
Map unitcM
Maternal parentHS-46
Paternal parentMARCABUCAG8US 1-88
Population size188
Number of loci1729
Number of QTL87
Number of linkage groups26
Publication[view all]
ContactZhu, Shui-Jin
Map Loci
This map contains 1,729 features:
Linkage GroupMarker NameLocus NameTypePosition
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb106K08r123i33646Ghmarker_locus0 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh056G21r691i40884Ghmarker_locus2.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb114N08f626i34473Ghmarker_locus2.65 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb039I24f479i26930Ghmarker_locus2.93 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb081I15f312i31090Ghmarker_locus3.17 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh095O04f491i44808Ghmarker_locus3.33 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb005B08f230i23440Ghmarker_locus4.14 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb120H14f204i35065Ghmarker_locus5.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb076P21f621i30624Ghmarker_locus6.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb081O14f181i31143Ghmarker_locus6.65 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBr168M15f539i48104Ghmarker_locus7.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh088J08r359i43956Ghmarker_locus8.06 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb100J08r336i33013Ghmarker_locus9.16 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb090L14r698i31992Ghmarker_locus10.54 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh060M15f331i41337Ghmarker_locus11.56 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01USDA_CFB1450i22232Ghmarker_locus11.71 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh044B13f633i39650Ghmarker_locus11.77 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBr166L16r128i48009Ghmarker_locus12.4 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh089P21f445i44111Ghmarker_locus12.78 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb014M03f198i24433Ghmarker_locus12.84 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh053N20f609i40667Ghmarker_locus13.12 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBh081I13f131i43196Ghmarker_locus13.33 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01CSIRO_D5chr02_647364i14520Ghmarker_locus13.47 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb040L12r140i27043Ghmarker_locus15.92 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01TAMU_GH_TBb099B11r355i32863Ghmarker_locus16.37 cM
Page
1
...
Contact
NameDetails
Zhu, Shui-Jin
Description:Cotton breeding; Cottongerplasm; Cotton biotechnology
First name:Shui-Jin
Last name:Zhu
Title:Professor/Director of Crop Science Institute, ZJU
Institution:Zhejiang University
Address:No 268, Kaixuan Road, Hangzhou, Zhejiang 310029
Country:China
Email:shjzhu@zju.edu.cn
Phone:+86-571-81703758
Fax:+86-571-86971117
Last update:27-Apr-2010
Map QTL
This map contains 87 QTL:
Linkage GroupNameTypeStartStopPeak
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qBWT.HSM-RIL_ch10.bg14QTL13.16 cM34.38 cM32.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qBWT.HSM-RIL_ch10.yc14QTL13.16 cM34.38 cM32.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qBWT.HSM-RIL_ch16.yc14QTL23.28 cM25.17 cM24.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr18qBWT.HSM-RIL_ch18.yc14QTL86.17 cM91.21 cM87.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr23qBWT.HSM-RIL_ch23.yc14QTL0 cM25.65 cM24.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qBWT.HSM-RIL_ch24.bg14QTL32.72 cM37.1 cM34.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr25qBWT.HSM-RIL_ch25.yc14QTL51.81 cM77.87 cM57.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qBWT.HSM-RIL_ch09.bg14QTL31.44 cM33.64 cM32.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qBWT.HSM-RIL_ch09.yc14QTL43.93 cM46.24 cM46.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr11qFEL.HSM-RIL_ch11.bg14QTL4.99 cM5.73 cM5.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.bg14.1QTL14.69 cM17.97 cM15.71 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.bg14.2QTL0.64 cM1.92 cM1.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.bg14.3QTL5.24 cM6.63 cM6.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.yc14QTL14.69 cM17.97 cM16.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qFEL.HSM-RIL_ch16.bg14QTL0.54 cM1.51 cM1.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr17qFEL.HSM-RIL_ch17.bg14QTL40.31 cM44.07 cM42.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr18qFEL.HSM-RIL_ch18.bg14QTL57.29 cM57.71 cM57.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFEL.HSM-RIL_ch20.bg14QTL42.13 cM53.91 cM47.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFEL.HSM-RIL_ch20.yc14QTL40.49 cM42.13 cM41.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qFEL.HSM-RIL_ch24.bg14QTL73.02 cM73.31 cM73.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qFEL.HSM-RIL_ch24.yc14QTL73.02 cM73.31 cM73.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qFL.HSM-RIL_ch10.bg14QTL41.7 cM47.14 cM44.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qFL.HSM-RIL_ch10.yc14QTL41.7 cM47.14 cM44.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qFL.HSM-RIL_ch12.yc14QTL0 cM47.93 cM16.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.bg14QTL24.01 cM28.69 cM25.71 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.yc14.1QTL13.78 cM15.82 cM14.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.yc14.2QTL19.81 cM21.23 cM20.91 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.yc14.3QTL22.2 cM24.01 cM23.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr15qFL.HSM-RIL_ch15.bg14QTL0 cM4.11 cM2.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr15qFL.HSM-RIL_ch15.yc14QTL0 cM4.11 cM3.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFL.HSM-RIL_ch19.yc14QTL21.27 cM22.73 cM22.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.bg14.1QTL10.33 cM11.83 cM11.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.bg14.2QTL39.87 cM40.01 cM40.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.yc14.1QTL44.36 cM46.2 cM45.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.yc14.2QTL50.75 cM52.26 cM52.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFL.HSM-RIL_ch09.bg14QTL1.8 cM8.98 cM3.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.1QTL5.24 cM7.83 cM6.71 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.2QTL13.78 cM15.82 cM14.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.3QTL21.4 cM21.81 cM21.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.4QTL39.59 cM40.31 cM40.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFS.HSM-RIL_ch19.bg14.1QTL21.65 cM22.73 cM22.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFS.HSM-RIL_ch19.bg14.2QTL27.56 cM27.81 cM27.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFS.HSM-RIL_ch20.yc14.1QTL41.5 cM53.91 cM42.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFS.HSM-RIL_ch20.yc14.2QTL57.77 cM80.1 cM59.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFS.HSM-RIL_ch05.bg14QTL54.06 cM55.45 cM54.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01qFU.HSM-RIL_ch01.bg14QTL13.49 cM15.92 cM14.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFU.HSM-RIL_ch19.yc14QTL20.54 cM21.65 cM20.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFU.HSM-RIL_ch05.bg14QTL44.36 cM45.59 cM45.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.1QTL1.8 cM8.98 cM3.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.2QTL17.75 cM18.33 cM18.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.3QTL52.3 cM52.89 cM52.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.4QTL46.38 cM48.44 cM47.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.1QTL1.8 cM8.98 cM3.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.2QTL46.38 cM48.44 cM47.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.3QTL52.41 cM52.89 cM52.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.4QTL59.47 cM61.82 cM61.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qLP.HSM-RIL_ch10.bg14QTL13.16 cM34.38 cM33.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qLP.HSM-RIL_ch10.yc14.1QTL34.38 cM35.39 cM35.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qLP.HSM-RIL_ch10.yc14.2QTL36.34 cM36.75 cM36.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qLP.HSM-RIL_ch12.bg14QTL0 cM16.18 cM4.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qLP.HSM-RIL_ch12.yc14.1QTL0 cM16.18 cM4.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qLP.HSM-RIL_ch12.yc14.2QTL51.77 cM52.71 cM52.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qLP.HSM-RIL_ch14.bg14.1QTL9.09 cM11.08 cM9.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qLP.HSM-RIL_ch14.bg14.2QTL64.91 cM69.83 cM69.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qLP.HSM-RIL_ch16.yc14QTL3.39 cM3.66 cM3.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr17qLP.HSM-RIL_ch17.bg14QTL7.23 cM11.67 cM7.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qLP.HSM-RIL_ch20.yc14QTL5.55 cM9.85 cM6.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr21qLP.HSM-RIL_ch21.bg14QTL45.29 cM49.52 cM49.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr21qLP.HSM-RIL_ch21.yc14QTL1.36 cM3.13 cM2.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr22qLP.HSM-RIL_ch22.yc14QTL16.38 cM19.21 cM16.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr03qLP.HSM-RIL_ch03.yc14QTL93.88 cM99.16 cM96.91 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr04qLP.HSM-RIL_ch04.bg14QTL10.46 cM11.57 cM11.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr04qLP.HSM-RIL_ch04.yc14QTL11.1 cM11.76 cM11.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qLP.HSM-RIL_ch05.yc14QTL10.91 cM11.83 cM11.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01qMIC.HSM-RIL_ch01.yc14QTL13.47 cM15.92 cM14.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qMIC.HSM-RIL_ch10.yc14QTL56.61 cM65.72 cM62.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qMIC.HSM-RIL_ch14.bg14QTL19.81 cM21.23 cM20.91 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qMIC.HSM-RIL_ch14.yc14QTL22.2 cM24.01 cM23.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.bg14.1QTL48.9 cM51.58 cM49.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.bg14.2QTL56.99 cM57.51 cM57.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.yc14.1QTL49.97 cM51.71 cM51.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.yc14.2QTL54.65 cM57.42 cM57.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr17qMIC.HSM-RIL_ch17.bg14QTL44.33 cM48.61 cM44.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qMIC.HSM-RIL_ch24.bg14.1QTL13.73 cM19.18 cM16.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qMIC.HSM-RIL_ch24.bg14.2QTL73.02 cM73.34 cM73.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qMIC.HSM-RIL_ch05.yc14QTL12.36 cM12.81 cM12.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07qMIC.HSM-RIL_ch07.bg14QTL53.34 cM67.03 cM59.31 cM
Publication
YearPublications
2016Li C, Dong Y, Zhao T, Li L, Li C, Yu E, Mei L, Daud MK, He Q, Chen J, Zhu S. Genome-Wide SNP Linkage Mapping and QTL Analysis for Fiber Quality and Yield Traits in the Upland Cotton Recombinant Inbred Lines Population. Frontiers in plant science. 2016; 7:1356.
Stock
NameTypeDetails
HS-46 x MARCABUCAG8US-1-88, RILpopulation
Pedigree:HS-46 / MARCABUCAG8US 1-88
Secondary id:cdbpop_000026
Alias:HM-RIL
Description:genetic mapping
Population size:188
View Map