HS-46 x MARCABUCAG8US-1-88, RIL (2016)

Map Overview

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NameHS-46 x MARCABUCAG8US-1-88, RIL (2016)
SpeciesGossypium hirsutum
Analysis methodinclusive composite interval mapping
SoftwareJoinMap 4.0
Map typegenetic
Population typeRIL
Population size188
Genome groupAD
Map unitcM
Maternal parentHS-46
Paternal parentMARCABUCAG8US 1-88
Population size188
Number of loci1729
Number of QTL87
Number of linkage groups26
Publication[view all]
ContactZhu, Shui-Jin
Map Loci
This map contains 1,729 features:
Linkage GroupMarker NameLocus NameTypePosition
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_10244003i01602Ghmarker_locus50.3 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_10464710i01611Ghmarker_locus50.33 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_10533060i01613Ghmarker_locus48.9 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_11056004i01627Ghmarker_locus45.43 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_11104358i01631Ghmarker_locus26.36 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_11228635i01640Ghmarker_locus34.36 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_11432143i01643Ghmarker_locus26.23 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_14181507i01688Ghmarker_locus52.2 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_14261312i01694Ghmarker_locus47.62 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_14315598i01696Ghmarker_locus19.8 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_16810373i01738Ghmarker_locus1.26 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_18489924i01765Ghmarker_locus18.95 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_18490136i01766Ghmarker_locus15.08 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_204719i01279Ghmarker_locus10.45 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_20519819i14406Ghmarker_locus14.17 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_3404871i13943Ghmarker_locus45.38 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_3408351i18208Ghmarker_locus5.97 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_4472037i01453Ghmarker_locus22.16 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_4819379i01463Ghmarker_locus42.48 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_4916458i14319Ghmarker_locus18.73 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr17CSIRO_D5chr01_54898132i14513Ghmarker_locus33.7 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_8862820i01582Ghmarker_locus46.66 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_8866578i01583Ghmarker_locus1.05 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07CSIRO_D5chr01_8868321i01587Ghmarker_locus46.66 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16CSIRO_D5chr01_9137601i01590Ghmarker_locus1.63 cM
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Contact
NameDetails
Zhu, Shui-Jin
Description:Cotton breeding; Cottongerplasm; Cotton biotechnology
First name:Shui-Jin
Last name:Zhu
Title:Professor/Director of Crop Science Institute, ZJU
Institution:Zhejiang University
Address:No 268, Kaixuan Road, Hangzhou, Zhejiang 310029
Country:China
Email:shjzhu@zju.edu.cn
Phone:+86-571-81703758
Fax:+86-571-86971117
Last update:27-Apr-2010
Map QTL
This map contains 87 QTL:
Linkage GroupNameTypeStartStopPeak
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qBWT.HSM-RIL_ch10.bg14QTL13.16 cM34.38 cM32.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qBWT.HSM-RIL_ch10.yc14QTL13.16 cM34.38 cM32.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qBWT.HSM-RIL_ch16.yc14QTL23.28 cM25.17 cM24.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr18qBWT.HSM-RIL_ch18.yc14QTL86.17 cM91.21 cM87.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr23qBWT.HSM-RIL_ch23.yc14QTL0 cM25.65 cM24.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qBWT.HSM-RIL_ch24.bg14QTL32.72 cM37.1 cM34.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr25qBWT.HSM-RIL_ch25.yc14QTL51.81 cM77.87 cM57.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qBWT.HSM-RIL_ch09.bg14QTL31.44 cM33.64 cM32.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qBWT.HSM-RIL_ch09.yc14QTL43.93 cM46.24 cM46.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr11qFEL.HSM-RIL_ch11.bg14QTL4.99 cM5.73 cM5.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.bg14.1QTL14.69 cM17.97 cM15.71 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.bg14.2QTL0.64 cM1.92 cM1.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.bg14.3QTL5.24 cM6.63 cM6.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFEL.HSM-RIL_ch14.yc14QTL14.69 cM17.97 cM16.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qFEL.HSM-RIL_ch16.bg14QTL0.54 cM1.51 cM1.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr17qFEL.HSM-RIL_ch17.bg14QTL40.31 cM44.07 cM42.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr18qFEL.HSM-RIL_ch18.bg14QTL57.29 cM57.71 cM57.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFEL.HSM-RIL_ch20.bg14QTL42.13 cM53.91 cM47.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFEL.HSM-RIL_ch20.yc14QTL40.49 cM42.13 cM41.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qFEL.HSM-RIL_ch24.bg14QTL73.02 cM73.31 cM73.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qFEL.HSM-RIL_ch24.yc14QTL73.02 cM73.31 cM73.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qFL.HSM-RIL_ch10.bg14QTL41.7 cM47.14 cM44.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qFL.HSM-RIL_ch10.yc14QTL41.7 cM47.14 cM44.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qFL.HSM-RIL_ch12.yc14QTL0 cM47.93 cM16.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.bg14QTL24.01 cM28.69 cM25.71 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.yc14.1QTL13.78 cM15.82 cM14.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.yc14.2QTL19.81 cM21.23 cM20.91 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFL.HSM-RIL_ch14.yc14.3QTL22.2 cM24.01 cM23.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr15qFL.HSM-RIL_ch15.bg14QTL0 cM4.11 cM2.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr15qFL.HSM-RIL_ch15.yc14QTL0 cM4.11 cM3.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFL.HSM-RIL_ch19.yc14QTL21.27 cM22.73 cM22.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.bg14.1QTL10.33 cM11.83 cM11.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.bg14.2QTL39.87 cM40.01 cM40.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.yc14.1QTL44.36 cM46.2 cM45.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFL.HSM-RIL_ch05.yc14.2QTL50.75 cM52.26 cM52.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFL.HSM-RIL_ch09.bg14QTL1.8 cM8.98 cM3.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.1QTL5.24 cM7.83 cM6.71 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.2QTL13.78 cM15.82 cM14.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.3QTL21.4 cM21.81 cM21.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qFS.HSM-RIL_ch14.yc14.4QTL39.59 cM40.31 cM40.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFS.HSM-RIL_ch19.bg14.1QTL21.65 cM22.73 cM22.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFS.HSM-RIL_ch19.bg14.2QTL27.56 cM27.81 cM27.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFS.HSM-RIL_ch20.yc14.1QTL41.5 cM53.91 cM42.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qFS.HSM-RIL_ch20.yc14.2QTL57.77 cM80.1 cM59.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFS.HSM-RIL_ch05.bg14QTL54.06 cM55.45 cM54.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01qFU.HSM-RIL_ch01.bg14QTL13.49 cM15.92 cM14.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr19qFU.HSM-RIL_ch19.yc14QTL20.54 cM21.65 cM20.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qFU.HSM-RIL_ch05.bg14QTL44.36 cM45.59 cM45.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.1QTL1.8 cM8.98 cM3.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.2QTL17.75 cM18.33 cM18.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.3QTL52.3 cM52.89 cM52.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.bg14.4QTL46.38 cM48.44 cM47.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.1QTL1.8 cM8.98 cM3.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.2QTL46.38 cM48.44 cM47.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.3QTL52.41 cM52.89 cM52.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr09qFU.HSM-RIL_ch09.yc14.4QTL59.47 cM61.82 cM61.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qLP.HSM-RIL_ch10.bg14QTL13.16 cM34.38 cM33.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qLP.HSM-RIL_ch10.yc14.1QTL34.38 cM35.39 cM35.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qLP.HSM-RIL_ch10.yc14.2QTL36.34 cM36.75 cM36.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qLP.HSM-RIL_ch12.bg14QTL0 cM16.18 cM4.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qLP.HSM-RIL_ch12.yc14.1QTL0 cM16.18 cM4.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr12qLP.HSM-RIL_ch12.yc14.2QTL51.77 cM52.71 cM52.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qLP.HSM-RIL_ch14.bg14.1QTL9.09 cM11.08 cM9.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qLP.HSM-RIL_ch14.bg14.2QTL64.91 cM69.83 cM69.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qLP.HSM-RIL_ch16.yc14QTL3.39 cM3.66 cM3.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr17qLP.HSM-RIL_ch17.bg14QTL7.23 cM11.67 cM7.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr20qLP.HSM-RIL_ch20.yc14QTL5.55 cM9.85 cM6.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr21qLP.HSM-RIL_ch21.bg14QTL45.29 cM49.52 cM49.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr21qLP.HSM-RIL_ch21.yc14QTL1.36 cM3.13 cM2.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr22qLP.HSM-RIL_ch22.yc14QTL16.38 cM19.21 cM16.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr03qLP.HSM-RIL_ch03.yc14QTL93.88 cM99.16 cM96.91 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr04qLP.HSM-RIL_ch04.bg14QTL10.46 cM11.57 cM11.11 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr04qLP.HSM-RIL_ch04.yc14QTL11.1 cM11.76 cM11.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qLP.HSM-RIL_ch05.yc14QTL10.91 cM11.83 cM11.21 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr01qMIC.HSM-RIL_ch01.yc14QTL13.47 cM15.92 cM14.51 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr10qMIC.HSM-RIL_ch10.yc14QTL56.61 cM65.72 cM62.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qMIC.HSM-RIL_ch14.bg14QTL19.81 cM21.23 cM20.91 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr14qMIC.HSM-RIL_ch14.yc14QTL22.2 cM24.01 cM23.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.bg14.1QTL48.9 cM51.58 cM49.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.bg14.2QTL56.99 cM57.51 cM57.41 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.yc14.1QTL49.97 cM51.71 cM51.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr16qMIC.HSM-RIL_ch16.yc14.2QTL54.65 cM57.42 cM57.01 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr17qMIC.HSM-RIL_ch17.bg14QTL44.33 cM48.61 cM44.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qMIC.HSM-RIL_ch24.bg14.1QTL13.73 cM19.18 cM16.81 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr24qMIC.HSM-RIL_ch24.bg14.2QTL73.02 cM73.34 cM73.31 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr05qMIC.HSM-RIL_ch05.yc14QTL12.36 cM12.81 cM12.61 cM
HS-46 x MARCABUCAG8US-1-88, RIL (2016).HSM-RIL_chr07qMIC.HSM-RIL_ch07.bg14QTL53.34 cM67.03 cM59.31 cM
Publication
YearPublications
2016Li C, Dong Y, Zhao T, Li L, Li C, Yu E, Mei L, Daud MK, He Q, Chen J, Zhu S. Genome-Wide SNP Linkage Mapping and QTL Analysis for Fiber Quality and Yield Traits in the Upland Cotton Recombinant Inbred Lines Population. Frontiers in plant science. 2016; 7:1356.
Stock
NameTypeDetails
HS-46 x MARCABUCAG8US-1-88, RILpopulation
Alias:HM-RIL
Description:genetic mapping
Population size:188
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