BNL1167

Marker Overview
NameBNL1167
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL1167_orig
Source Typegenomic
Repeat Motif(GA)15
PCR ConditionAnnealing temperature: 55
Primer 1BNL1167_F: ACGGCGTTACAAGGCATTAC
Primer 2BNL1167_R: ACTTAGTTTCTCAAAAAAAAAAATGC
CommentPrimer data obtained in 2000
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocusMapViewer
1Monsanto SSR Bin Map, (2009)Monsanto SSR Bin Map, (2009).BIN-SSR_chr04N/AAD_chr.04110BNL1167View
2TM-1 x 3-79, RIL (2012)TM-1 x 3-79, RIL (2012).T3-RIL.12_c04N/AAD_chr.0445.68BNL1167View
3Yumian-1 x T586, RIL (2006)YT-RIL_chr04-3N/AAD_chr.049.6BNL1167View
4Yumian-1 x T586, RIL (2015)YT-RIL.15_chr04N/AAD_chr.0426.5BNL1167View
5TM-1 x 3-79, RIL (2014)T3-RIL.14_chr04N/AAD_chr.0446.3BNL1167View
6GX1135 x GX100-2, F2 (2013)GG-F2_chr04N/AAD_chr.043.8BNL1167View
7GX1135 x GX100-2, RIL (2016)GG-RIL.16_chr04-1N/AAD_chr.0439.1BNL1167View
8GX1135 x VGX100-2, RIL (2016)GVG-RIL_chr04N/AAD_chr.040BNL1167View
9Yumian-1 x T586, RIL (2009)YT-RIL_chr04-2N/AAD_chr.040BNL1167/110yView
10TM-1 x 3-79, RIL (2012.v3)T3-RIL.12v3_chr.04N/AAD_chr.0446.3BNL1167-46.298View
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
BNL1167_FBNL1167_FGossypium hirsutumprimer
BNL1167_RBNL1167_RGossypium hirsutumprimer


This genetic_marker is adjacent to the following QTL feature(s):

Feature NameUnique NameSpeciesType
fiber elongationqFEL.GG-F2_ch04.sy07Gossypium hirsutumQTL


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
BNL1167BNL1167Gossypium hirsutummarker_locus
BNL1167/110yBNL1167/110yGossypium hirsutummarker_locus
BNL1167BNL1167-46.298Gossypium hirsutummarker_locus


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL1167_origBNL1167_origGossypium hirsutumsequence_feature


Germplasm
Stock NameType
Deltapine 90TBD
Sequence
>BNL1167 ID=BNL1167|Name=BNL1167|organism=Gossypium hirsutum|type=genetic_marker|length=114bp
ACGGCGTTACAAGGCATTACAAAACAATTCACAGCTTAAGAGGGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGTCATTCATAACTATGCATTTTTTTTT
TTGAGAAACTAAGT