BNL0861

Marker Overview
NameBNL0861
AliasBNL861
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL0861_orig
Source Typegenomic
Repeat Motif(AC)21
PCR ConditionAnnealing temperature: 55
Primer 1BNL0861_F: AAGATGGTAGTGGCTTGAACG
Primer 2BNL0861_R: GTTCCTTCTTACTTCCATGTGC
CommentPrimer data obtained in 2000
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)Emian-22 x 3-79, BC1 (2011).E3-BC1_chr06N/AAD_chr.0689.73BNL861View
2DH962 x Jinmian-6, F2 (2009)DJ-F2_chr13N/AAD_chr.1359.8BNL861View
3DH962 x Jinmian-6, F2 (2009)DJ-F2_chr13/LG10N/AAD_chr.1359.8BNL861View
4DH962 X Ji Mian 5, F2 (2015)DJiM-F2_chr13-1N/AAD_chr.1338.17BNL861View
5DH962 x Ji Mian 5, RIL (2015)DJiM-RIL_chr13-1N/AAD_chr.13-11.9BNL861View
6AD-genome wide Reference Map (2009)AD-genome wide Reference Map (2009).Ref-chr06N/AAD_chr.06129bnl0861View
7(YM-1 x CCRI-35) x (YM-1 x 7235), 4WC (2012)YCY7-4WC_chr13N/AAD_chr.1345.6bnl0861View
8Yumian-1 x 7235, RIL (2015)Y7-RIL_chr13N/AAD_chr.1318.8bnl0861View
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
BNL0861_FBNL0861_FGossypium hirsutumprimer
BNL0861_RBNL0861_RGossypium hirsutumprimer


This genetic_marker is adjacent to the following QTL feature(s):

Feature NameUnique NameSpeciesType
lint percentqLP.DJiM-RIL_ch13-1.h11.1Gossypium hirsutumQTL
lint percentqLP.DJiM-RIL_ch13-1.h11.2Gossypium hirsutumQTL
lint percentqLP.DJiM-RIL_ch13-1.hj08-13.1Gossypium hirsutumQTL
lint yieldqLY.DJiM-RIL_ch13-1.h11Gossypium hirsutumQTL


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
BNL861BNL861Gossypium hirsutummarker_locus
bnl0861bnl0861Gossypium hirsutummarker_locus


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL0861_origBNL0861_origGossypium hirsutumsequence_feature


Germplasm
Stock NameType
Deltapine 90TBD
Sequence
>BNL0861 ID=BNL0861|Name=BNL0861|organism=Gossypium hirsutum|type=genetic_marker|length=240bp
AAGATGGTAGTGGCTTGAACGTAAAGAGTGGTGTTTACTTCATATCATAA
ACATATTGCATTTAGACTAACGACTTTAGATAACCATTATCCACACAACA
ACTTCCATTCATTACACACACACACACACACACACACACACACACACACA
CACACTTTTTATCCTTTACAAAGGAAGAACACTTACTTTACACGTAATAT
TAAAATAATAAAGTTAAAGCACATGGAAGTAAGAAGGAAC