MD-5678ne x Prema, F2:3 (2000)

Map Overview

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NameMD-5678ne x Prema, F2:3 (2000)
SpeciesGossypium hirsutum
Map typeGenetic
Population typeF2.3
Genome groupAD
Map unitcM
Maternal parentAcala Prema
Paternal parentMD5678 ne
Population size119
Number of loci81
Number of QTL26
Number of linkage groups17
Publication[view all]
ContactUlloa, Mauricio
Map Loci
This map contains 81 features:
Linkage GroupMarker NameLocus NameTypePosition
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A87E3A87E3marker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A89C1A89C1amarker_locus31.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A87B5A87B5amarker_locus41.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A22C3A22C3amarker_locus46.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A81E4A81E4marker_locus48.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A78D2A78D2marker_locus58.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A81A3A81A3amarker_locus64.8 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A81A3A81A3bmarker_locus64.8 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A88C2A88C2marker_locus82 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A58B5A58B5bmarker_locus87.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A50C6A50C6bmarker_locus93.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A80F3A80F3bmarker_locus105 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A38A5A38A5bmarker_locus113.5 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A42B1A42B1bmarker_locus116.5 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A64E3A64E3amarker_locus132.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A1A5A1A5marker_locus142.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A64C1A64C1marker_locus153.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A85D6A85D6amarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A89B5A89B5amarker_locus17.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A51D5A51D5marker_locus34 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A86A5A86A5amarker_locus35.8 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A86A5A86A5bmarker_locus39.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A86A5A86A5cmarker_locus42.9 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A89E1A89E1marker_locus67.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group11A52C6A52C6marker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group11A56E2A56E2marker_locus10.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group12A52E2A52E2marker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group12A79E1A79E1amarker_locus23.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group13A62A6A62A6bmarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group13A53B6A53B6amarker_locus2.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group14A85E1A85E1amarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group14A86F4A86F4amarker_locus9.3 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group15A43B6A43B6marker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group15A64C4A64C4marker_locus32.5 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group16A14E1A14E1amarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group16A14E1A14E1bmarker_locus20.3 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group17A17A6A17A6marker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group17A19F4A19F4marker_locus21 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group02A5D2A5D2bmarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group02A12D1A12D1marker_locus5 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03A50C1A50C1amarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03A60B1A60B1cmarker_locus9.3 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03A61A1A61A1marker_locus12.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03A50C1A50C1bmarker_locus14 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03A81F4A81F4bmarker_locus17.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03A5F4A5F4marker_locus31.9 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03A16F2A16F2amarker_locus58 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group04A38F4A38F4marker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group04A41E5A41E5marker_locus13.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group04A12D4A12D4marker_locus29.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group04A13B1A13B1marker_locus47.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A80A5A80A5bmarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A13F1A13F1marker_locus26.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A80A5A80A5amarker_locus29 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A50E3A50E3bmarker_locus30.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A86F1A86F1marker_locus31.3 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A79C3A79C3bmarker_locus32.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A30A2A30A2bmarker_locus33.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A83E2A83E2amarker_locus38.9 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A43F5A43F5amarker_locus41.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A43F5A43F5bmarker_locus42.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A84B2A84B2amarker_locus44.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A85B5A85B5amarker_locus49.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A61C4A61C4bmarker_locus73.9 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A49F2A49F2amarker_locus81.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05A47F2A47F2amarker_locus87.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group06A26D2A26D2cmarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group06A82B1A82B1bmarker_locus13.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group06A16F4A16F4marker_locus29.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group06A26D2A26D2amarker_locus57.5 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group06A25D5A25D5marker_locus84.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07A42E4A42E4bmarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07A53E2A53E2bmarker_locus10.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07A20E2A20E2amarker_locus25.4 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07A20E2A20E2bmarker_locus31.8 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07A70D2A70D2amarker_locus40.3 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07A34B1A34B1marker_locus58.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group08A28C1A28C1amarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group08A28C1A28C1bmarker_locus1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group09A58D3A58D3cmarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group09A44D2A44D2marker_locus19 cM
Contact
NameDetails
Ulloa, Mauricio
Description:Breeding, genetics, and Genomics
First name:Mauricio
Last name:Ulloa
Title:Research Geneticist
Institution:USDA-ARS, W.I.C.S., Res. Unit
Address:17053 N. Shafter Ave., Shafter, California 93263
Country:United States
Email:mauricio.ulloa@ars.usda.gov
Phone:661-746-8009
Fax:746-746-1619
Keywords:Breeding and Genomics
Last update:27-Apr-2010
Map QTL
This map contains 26 QTL:
Linkage GroupNameTypeStartStopPeak
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qSL2.5.MP-F2:3_group01QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qSI.MP-F2:3_group01QTL79 cM82 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.4QTL142.6 cM145.6 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.3QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.2QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.1QTL94.7 cM97.7 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qLP.MP-F2:3_group01.2QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qLP.MP-F2:3_group01.1QTL94.7 cM97.7 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qFS.MP-F2:3_group01.2QTL120.5 cM123.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qFS.MP-F2:3_group01.1QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qFP.MP-F2:3_group01QTL120.5 cM123.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10qLY.MP-F2:3_group10QTL0 cM3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10qLP.MP-F2:3_group10QTL9 cM12 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10qFP.MP-F2:3_group10QTL56.5 cM59.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group15qSL2.5.MP-F2:3_group15QTL26.5 cM29.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group17qLY.MP-F2:3_group17QTL0 cM3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qSL50.MP-F2:3_group03QTL9.3 cM12.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qSI.MP-F2:3_group03QTL21 cM24 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qFM.MP-F2:3_group03QTL33.9 cM36.9 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qFEL.MP-F2:3_group03.2QTL21 cM24 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qFEL.MP-F2:3_group03.1QTL9.3 cM12.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05qFP.MP-F2:3_group05QTL3 cM6 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group06qFS.MP-F2:3_group06QTL15.2 cM18.2 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07qFP.MP-F2:3_group07QTL41.3 cM44.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07qFM.MP-F2:3_group07QTL41.3 cM44.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group09qFEL.MP-F2:3_group09QTL4 cM7 cM-
Publication
YearPublications
2000Genetic linkage map and QTL analysis of agronomic and fiber quality traits in an intraspecific population.
2002Ulloa M, Meredith WJ, Shappley Z, Kahler A. RFLP genetic linkage maps from four F2.3 populations and a joinmap of Gossypium hirsutum L. Theoretical and applied genetics. 2002 Feb; 104(2/3):200-208
2005Ulloa M, Saha S, Jenkins JN, Meredith WR, McCarty JC, Stelly DM. Chromosomal Assignment of RFLP Linkage Groups Harboring Important QTLs on an Intraspecific Cotton (Gossypium hirsutum L.) Joinmap. Journal of heredity. 2005; 96(2):132-144
Stock
NameTypeDetails
MD-5678ne x Prema, F2:3population
Alias:3
Description:genetic mapping
Population size:119
Secondary id:cdbpop_000028
Origin:Mississippi, USA
Cross References
External references for this map
DatabaseAccession
CottonGen CMap7