MD-5678ne x Prema, F2:3 (2000)

Map Overview

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NameMD-5678ne x Prema, F2:3 (2000)
SpeciesGossypium hirsutum
Map typeGenetic
Population typeF2.3
Genome groupAD
Map unitcM
Maternal parentAcala Prema
Paternal parentMD5678 ne
Population size119
Number of loci81
Number of QTL26
Number of linkage groups17
Publication[view all]
ContactUlloa, Mauricio
Map Loci
This map contains 81 features:
Linkage GroupMarker NameLocus NameTypePosition
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A87E3A87E3marker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A89C1A89C1amarker_locus31.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A87B5A87B5amarker_locus41.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A22C3A22C3amarker_locus46.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A81E4A81E4marker_locus48.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A78D2A78D2marker_locus58.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A81A3A81A3amarker_locus64.8 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A81A3A81A3bmarker_locus64.8 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A88C2A88C2marker_locus82 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A58B5A58B5bmarker_locus87.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A50C6A50C6bmarker_locus93.2 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A80F3A80F3bmarker_locus105 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A38A5A38A5bmarker_locus113.5 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A42B1A42B1bmarker_locus116.5 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A64E3A64E3amarker_locus132.1 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A1A5A1A5marker_locus142.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01A64C1A64C1marker_locus153.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A85D6A85D6amarker_locus0 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A89B5A89B5amarker_locus17.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A51D5A51D5marker_locus34 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A86A5A86A5amarker_locus35.8 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A86A5A86A5bmarker_locus39.6 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A86A5A86A5cmarker_locus42.9 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10A89E1A89E1marker_locus67.7 cM
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group11A52C6A52C6marker_locus0 cM
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Contact
NameDetails
Ulloa, Mauricio
Description:Breeding, genetics, and Genomics
First name:Mauricio
Last name:Ulloa
Title:Research Geneticist
Institution:USDA-ARS, W.I.C.S., Res. Unit
Address:17053 N. Shafter Ave., Shafter, California 93263
Country:United States
Email:mauricio.ulloa@ars.usda.gov
Phone:661-746-8009
Fax:746-746-1619
Keywords:Breeding and Genomics
Last update:27-Apr-2010
Map QTL
This map contains 26 QTL:
Linkage GroupNameTypeStartStopPeak
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qSL2.5.MP-F2:3_group01QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qSI.MP-F2:3_group01QTL79 cM82 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.4QTL142.6 cM145.6 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.3QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.2QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qMIC.MP-F2:3_group01.1QTL94.7 cM97.7 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qLP.MP-F2:3_group01.2QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qLP.MP-F2:3_group01.1QTL94.7 cM97.7 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qFS.MP-F2:3_group01.2QTL120.5 cM123.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qFS.MP-F2:3_group01.1QTL113.5 cM116.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group01qFP.MP-F2:3_group01QTL120.5 cM123.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10qLY.MP-F2:3_group10QTL0 cM3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10qLP.MP-F2:3_group10QTL9 cM12 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group10qFP.MP-F2:3_group10QTL56.5 cM59.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group15qSL2.5.MP-F2:3_group15QTL26.5 cM29.5 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group17qLY.MP-F2:3_group17QTL0 cM3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qSL50.MP-F2:3_group03QTL9.3 cM12.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qSI.MP-F2:3_group03QTL21 cM24 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qFM.MP-F2:3_group03QTL33.9 cM36.9 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qFEL.MP-F2:3_group03.2QTL21 cM24 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group03qFEL.MP-F2:3_group03.1QTL9.3 cM12.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group05qFP.MP-F2:3_group05QTL3 cM6 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group06qFS.MP-F2:3_group06QTL15.2 cM18.2 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07qFP.MP-F2:3_group07QTL41.3 cM44.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group07qFM.MP-F2:3_group07QTL41.3 cM44.3 cM-
MD-5678ne x Prema, F2:3 (2000).MP-F2:3_group09qFEL.MP-F2:3_group09QTL4 cM7 cM-
Publication
YearPublications
2000Genetic linkage map and QTL analysis of agronomic and fiber quality traits in an intraspecific population.
2002Ulloa M, Meredith WJ, Shappley Z, Kahler A. RFLP genetic linkage maps from four F2.3 populations and a joinmap of Gossypium hirsutum L. Theoretical and applied genetics. 2002 Feb; 104(2/3):200-208
2005Ulloa M, Saha S, Jenkins JN, Meredith WR, McCarty JC, Stelly DM. Chromosomal Assignment of RFLP Linkage Groups Harboring Important QTLs on an Intraspecific Cotton (Gossypium hirsutum L.) Joinmap. Journal of heredity. 2005; 96(2):132-144
Stock
NameTypeDetails
MD-5678ne x Prema, F2:3population
Alias:3
Description:genetic mapping
Population size:119
Secondary id:cdbpop_000028
Origin:Mississippi, USA
Cross References
External references for this map
DatabaseAccession
CottonGen CMap7
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