MCU-5 x Siokra 1-4, RIL (2015 SNP)

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NameMCU-5 x Siokra 1-4, RIL (2015 SNP)
SpeciesGossypium hirsutum
Map typeGenetic
Genome groupAD
Map unitcM
Number of loci1244
Number of QTL4
Number of linkage groups53
Publication[view all]
ContactN/A
Map Loci
This map contains 1,244 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG20CSIRO_D5chr10_1809859Chr10_1809858marker_locus43.22 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_10565960Chr10_10565959marker_locus0 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_11546432Chr10_11546431marker_locus2.45 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_22793083Chr10_22793083marker_locus13.66 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_39713051Chr10_39713050marker_locus14.75 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr03_7860740Chr03_7860740marker_locus15.4 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_42422337Chr10_42422336marker_locus15.61 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr01_23730226Chr01_23730226marker_locus16.05 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_51715999Chr10_51715998marker_locus17.16 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_50734811Chr10_50734810marker_locus17.79 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_49391711Chr10_49391710marker_locus18.44 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_52329989Chr10_52329988marker_locus18.66 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_47244532Chr10_47244532marker_locus19.53 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_38948869Chr10_38948869marker_locus19.96 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_42718176Chr10_42718175marker_locus20.84 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_40678971Chr10_40678970marker_locus21.73 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_37715824Chr10_37715823marker_locus23.94 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_40807381Chr10_40807381marker_locus28.06 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr06_17073885Chr06_17073885marker_locus28.91 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_41983287Chr10_41983286marker_locus29.55 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_40194323Chr10_40194322marker_locus29.76 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_38646104Chr10_38646103marker_locus30.4 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_50271690Chr10_50271689marker_locus31.7 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5chr10_53395962Chr10_53395961marker_locus32.33 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21CSIRO_D5Chr10_52632095Chr10_52632094marker_locus32.97 cM
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Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C04_LG15qPC.MS-chr04QTL0 cM19.03 cM-
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21qDTL.MS-chr06QTL32.33 cM33.83 cM-
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C11_LG43qDTL.MS-chr11QTL0 cM13.55 cM-
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C15_LG04qLS.MS-chr15QTL0 cM8.8 cM-
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Publication
YearPublications
2014Zhu QH, Spriggs A, Taylor JM, Llewellyn D, Wilson I. Transcriptome and Complexity-Reduced-DNA Based Identification of Intraspecies Single Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. G3 (Bethesda, Md.). 2014 Aug 7.
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