MCU-5 x Siokra 1-4, RIL (2015 SNP)

Map Overview

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NameMCU-5 x Siokra 1-4, RIL (2015 SNP)
SpeciesGossypium hirsutum
Map typeGenetic
Genome groupAD
Map unitcM
Number of loci1244
Number of QTL4
Number of linkage groups53
Publication[view all]
ContactN/A
Map Loci
This map contains 1,244 features:
Linkage GroupMarker NameLocus NameTypePosition
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_661422Chr02_661421marker_locus0 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_1077612Chr02_1077611marker_locus8.96 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_1341878Chr02_1341877marker_locus10.73 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_1340258Chr02_1340257marker_locus11.38 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_2239953Chr02_2239952marker_locus20 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_2102128Chr02_2102127marker_locus21.95 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5Chr02_2033674Chr02_2033673marker_locus29.82 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_3314586Chr02_3314586marker_locus41.49 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_3170264Chr02_3170264marker_locus49.61 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_4639850Chr02_4639849marker_locus57.81 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_7294127Chr02_7294126marker_locus64.33 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_8461788Chr02_8461788marker_locus72.16 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_8507643Chr02_8507642marker_locus74.57 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG01CSIRO_D5chr02_8333477Chr02_8333476marker_locus82.4 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG02CSIRO_D5chr02_11929302Chr02_11929302marker_locus0 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG02CSIRO_D5chr02_12897796Chr02_12897796marker_locus3.69 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG02CSIRO_D5chr02_14443824Chr02_14443824marker_locus6.1 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG02CSIRO_D5chr02_16149649Chr02_16149648marker_locus7.6 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG02CSIRO_D5chr02_14163983Chr02_14163983marker_locus9.32 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG02CSIRO_D5chr02_13879289Chr02_13879289marker_locus11.96 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C01_LG02CSIRO_D5chr02_16207154Chr02_16207153marker_locus19.75 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C02_LG05CSIRO_D5chr03_2811320Chr03_2811319marker_locus0 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C02_LG05CSIRO_D5chr03_3637034Chr03_3637033marker_locus14.53 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C02_LG05CSIRO_D5chr03_6276406Chr03_6276405marker_locus23.3 cM
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C02_LG05CSIRO_D5chr03_22553832Chr03_22553832marker_locus26.89 cM
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Map QTL
This map contains 4 QTL:
Linkage GroupNameTypeStartStopPeak
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C04_LG15qPC.MS-chr04QTL0 cM19.03 cM-
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C06_LG21qDTL.MS-chr06QTL32.33 cM33.83 cM-
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C11_LG43qDTL.MS-chr11QTL0 cM13.55 cM-
MCU-5 × Siokra 1−4, RIL (2014 SNP).MS-RIL_C15_LG04qLS.MS-chr15QTL0 cM8.8 cM-
Publication
YearPublications
2014Zhu QH, Spriggs A, Taylor JM, Llewellyn D, Wilson I. Transcriptome and Complexity-Reduced-DNA Based Identification of Intraspecies Single Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. G3 (Bethesda, Md.). 2014 Aug 7.
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