HAU3218

Marker Overview
NameHAU3218
Genbank IDGR716890
TypeSSR
SpeciesGossypium spp.
Source SequenceGR708102.1
Source TypeEST
Repeat Motif(AC)25
PCR ConditionAnnealing temperature: 56.5
Primer 1HAU3218_F: TCCAGCGAAGGGAGAGGAGA
Primer 2HAU3218_R: GGCCTTCGCCACCGTCAATA
Product Length152
Publication[view all]
CommentPrimer data obtained in 2012
References
External references for this genetic_marker
DatabaseAccession
DB:genbankGR716890
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocusMapViewer
1Yumian-1 x T586, RIL (2015)YT-RIL.15_chr14N/AAD_chr.14135.3HAU3218View
2Yumian-1 x 7235, RIL (2015)Y7-RIL_chr14N/AAD_chr.1491.4HAU3218View
3CCRI 12-4 x (AD)5-7, F2 (2015)CAD5-F2_chr03N/AAt.0325.1HAU3218View
4CCRI-35 x Yumian-1, RIL (2015)CY-RIL_chr14N/AAD_chr.1414.5HAU3218View
5CCRI 12-4 x (AD)5-7, F2 (2015)CAD5-F2_chr03N/AAt.0339.4HAU3218-39.4View
6CCRI-35 x Yumian-1, RIL (2017)CY-RIL.17_chr14N/ADt.02127.58HAU3218-127.575View
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
HAU3218_FHAU3218_FGossypium spp.primer
HAU3218_RHAU3218_RGossypium spp.primer


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
GR708102.1GR708102.1Gossypium spp.sequence_feature


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
HAU3218HAU3218Gossypium spp.marker_locus
HAU3218HAU3218-39.4Gossypium spp.marker_locus
HAU3218HAU3218-127.575Gossypium spp.marker_locus


Sequence
>HAU3218 ID=HAU3218|Name=HAU3218|organism=Gossypium spp.|type=genetic_marker|length=152bp
TCCAGCGAAGGGAGAGGAGAGACACACACACACACACACACACACACACA
CACACACACACACACACACACAGAGATCTTCAAATTTCATCAATGGATCA
TTCAAAGGTTCAAGAGATCGTGGAGAAGCAGGTATTGACGGTGGCGAAGG
CC