TMB1791

Marker Overview
NameTMB1791
AliasTMH C26-K23
Genbank IDBV679673
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceBV679673.1
Source Typegenomic
Repeat Motif(GA)15+(CA)8
PCR ConditionAnnealing temperature: 55
Primer 1TMB1791_F: GAGATCGTTTATCATTCCCACA
Primer 2TMB1791_R: TCTACCGGCCTCGTAAGCTA
Product Length196
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679673
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)TM-1 x 3-79, RIL (2012).T3-RIL.12_c05N/AAD_chr.0569.38TMB1791View
2Yumian-1 x T586, RIL (2006)YT-RIL_chr19-2N/AAD_chr.1977.2TMB1791View
3(YM-1 x CCRI-35) x (YM-1 x 7235), 4WC (2012)YCY7-4WC_chr19-3N/AAD_chr.192.6TMB1791View
4Yumian-1 x T586, RIL (2015)YT-RIL.15_chr19N/AAD_chr.1961.3TMB1791View
5TM-1 x 3-79, RIL (2014)T3-RIL.14_chr05N/AAD_chr.05132.1TMB1791View
6CCRI 12-4 x (AD)5-7, F2 (2015)CAD5-F2_chr19N/ADt.05118.9TMB1791View
7CCRI-35 x Yumian-1, RIL (2015)CY-RIL_chr19N/AAD_chr.1960.2TMB1791View
8Yumian-1 x T586, RIL (2009)YT-RIL_chr03-3N/AAD_chr.034.7TMB1791/190tView
9CCRI-35 x Yumian-1, RIL (2017)CY-RIL.17_chr19N/ADt.0567.49TMB1791-67.489View
10TM-1 x 3-79, RIL (2012.v3)T3-RIL.12v3_chr.05N/AAD_chr.05132.11TMB1791-132.109View
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
TMB1791_FTMB1791_FGossypium hirsutumprimer
TMB1791_RTMB1791_RGossypium hirsutumprimer


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
TMB1791TMB1791Gossypium hirsutummarker_locus
TMB1791/190tTMB1791/190tGossypium hirsutummarker_locus
TMB1791TMB1791-67.489Gossypium hirsutummarker_locus
TMB1791TMB1791-132.109Gossypium hirsutummarker_locus


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BV679673.1BV679673.1Gossypium hirsutumsequence_feature


Germplasm
Stock NameType
TM-1TBD
Sequence
>TMB1791 ID=TMB1791|Name=TMB1791|organism=Gossypium hirsutum|type=genetic_marker|length=196bp
GAGATCGTTTATCATTCCCACATACATATATATATATGTGTGTGTGTGTG
TGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCATAAATGAAACAAA
AGACGACATGAACTTCATAACATTAAATCCAACTTGGTTTTGGGTTCGAT
TTCTTTTATGTTGTGCTCATGAATGTTAGCTTACGAGGCCGGTAGA