MGHES0076

Marker Overview
NameMGHES0076
AliasMGHES76
MGHES-76
MGHES-076
Genbank IDAF336284
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceAF336284.1
Source TypeEST
Repeat Motif(GA)20
PCR ConditionAnnealing temperature: 55
Primer 1MGHES76_F: ATGGGGTCATCCTCCATTTT
Primer 2MGHES76_R: TTTCTCCATTTGCCTTCACC
Product Length207
PolymorphismP_ MGHES0076
Publication[view all]
CommentGHMYB36; Primer data obtained in 2005
References
External references for this genetic_marker
DatabaseAccession
DB:genbankAF336284
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)TM-1 x 3-79, RIL (2012).T3-RIL.12_c16N/AAD_chr.169.25MGHES076View
2TM-1 x 3-79, RIL (2014)T3-RIL.14_chr16N/AAD_chr.16116.9MGHES076View
3Yumian-1 x T586, RIL (2006)YT-RIL_chr16-1N/AAD_chr.1637.6MGHES76View
4(YM-1 x CCRI-35) x (YM-1 x 7235), 4WC (2012)YCY7-4WC_chr16-1N/AAD_chr.169.9MGHES76View
5Yumian-1 x T586, RIL (2015)YT-RIL.15_chr16N/AAD_chr.164.1MGHES76View
6CCRI-35 x Yumian-1, RIL (2015)CY-RIL_chr16N/AAD_chr.1631.1MGHES76View
7Yumian-1 x T586, RIL (2009)YT-RIL_chr16-1N/AAD_chr.1621MGHES76/200tView
8CCRI-35 x Yumian-1, RIL (2017)CY-RIL.17_chr16N/ADt.0715.38MGHES76-15.378View
9TM-1 x 3-79, RIL (2012.v3)T3-RIL.12v3_chr.16N/AAD_chr.16116.92MGHES076-116.917View
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
MGHES76_FMGHES76_FGossypium hirsutumprimer
MGHES76_RMGHES76_RGossypium hirsutumprimer


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
MGHES076MGHES076Gossypium hirsutummarker_locus
MGHES76MGHES76Gossypium hirsutummarker_locus
MGHES76/200tMGHES76/200tGossypium hirsutummarker_locus
MGHES76MGHES76-15.378Gossypium hirsutummarker_locus
MGHES076MGHES076-116.917Gossypium hirsutummarker_locus


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AF336284.1AF336284.1Gossypium hirsutumsequence_feature


Publications
YearPublication
2004EST-SSR: A new class of genetic markers in cotton.
Germplasm
Stock NameType
Acala Maxxacultivar
Sequence
>MGHES0076 ID=MGHES0076|Name=MGHES0076|organism=Gossypium hirsutum|type=genetic_marker|length=210bp
ATGGGGTCATCCTCCATTTTTATGGGTTTATAAATAGAGGGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTAGGAGAAAATATGGGA
AGAAGTCCATGTTGCTCCAAGGAAGGACTCAACAAAGGAGCTTGGACTGC
TTTAGAAGATAAAATACTTGCATCATATATTCATGTTCATGGTGAAGGCA
AATGGAGAAA