g.arboreum_cottongen_reftransV1_0001749, g.arboreum_cottongen_reftransV1_0001749 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0001749
Unique Name	g.arboreum_cottongen_reftransV1_0001749
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	403

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0001749:1..403 . Chr7:38851917..38853944 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2QYC9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 5.507e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2M531_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 7.298e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2Q649_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 8.121e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0B0NUU6_GOSAR (Zinc-binding alcohol dehydrogenase domain-containing 2 OS=Gossypium arboreum GN=F383_01891 PE=4 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 9.544e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2NGC0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.156e-88
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2PYU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007800 PE=4 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.554e-74
Identity = 113/134 (84.33%), Postives = 123/134 (91.79%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQA QKPGVIIN  S AGL+P FL P+YS SKGGV++FTRSLTPYKR+GIRVNVLCPE VRTEM EK+DPK +SLMGGFVPME+VVKGAFELITDESRAGSCLWI+NRRG+ YW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQAQQKPGVIINVASSAGLYPLFLGPVYSASKGGVIMFTRSLTPYKRQGIRVNVLCPEFVRTEMVEKMDPKLISLMGGFVPMEMVVKGAFELITDESRAGSCLWITNRRGLEYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2NGC6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007800 PE=4 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.267e-74
Identity = 113/134 (84.33%), Postives = 123/134 (91.79%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQA QKPGVIIN  S AGL+P FL P+YS SKGGV++FTRSLTPYKR+GIRVNVLCPE VRTEM EK+DPK +SLMGGFVPME+VVKGAFELITDESRAGSCLWI+NRRG+ YW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQAQQKPGVIINVASSAGLYPLFLGPVYSASKGGVIMFTRSLTPYKRQGIRVNVLCPEFVRTEMVEKMDPKLISLMGGFVPMEMVVKGAFELITDESRAGSCLWITNRRGLEYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A061DZW3_THECC (ARP protein (REF) isoform 3 OS=Theobroma cacao GN=TCM_007040 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.113e-74
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNL+AV+DCTRLAIKTMQALQKPGVIIN GS AGL+P ++DPIYSGSK GVV+FTRSL PYKR+GIRVNVLCPE V+TEMGEKL  +++SLMGGFVPME+VVKGA ELI D+SRAGSCLWI+NRRGM YW
Sbjct:  121 HTINVNLIAVVDCTRLAIKTMQALQKPGVIINLGSAAGLYPAYVDPIYSGSKAGVVMFTRSLAPYKRQGIRVNVLCPEFVQTEMGEKLGHRFISLMGGFVPMEMVVKGALELIMDKSRAGSCLWITNRRGMEYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A061DZP5_THECC (ARP protein (REF) isoform 2 OS=Theobroma cacao GN=TCM_007040 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.727e-72
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNL+AV+DCTRLAIKTMQALQKPGVIIN GS AGL+P ++DPIYSGSK GVV+FTRSL PYKR+GIRVNVLCPE V+TEMGEKL  +++SLMGGFVPME+VVKGA ELI D+SRAGSCLWI+NRRGM YW
Sbjct:  121 HTINVNLIAVVDCTRLAIKTMQALQKPGVIINLGSAAGLYPAYVDPIYSGSKAGVVMFTRSLAPYKRQGIRVNVLCPEFVQTEMGEKLGHRFISLMGGFVPMEMVVKGALELIMDKSRAGSCLWITNRRGMEYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A061E7L3_THECC (ARP protein (REF) isoform 1 OS=Theobroma cacao GN=TCM_007040 PE=4 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.131e-72
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = -1

Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNL+AV+DCTRLAIKTMQALQKPGVIIN GS AGL+P ++DPIYSGSK GVV+FTRSL PYKR+GIRVNVLCPE V+TEMGEKL  +++SLMGGFVPME+VVKGA ELI D+SRAGSCLWI+NRRGM YW
Sbjct:  121 HTINVNLIAVVDCTRLAIKTMQALQKPGVIINLGSAAGLYPAYVDPIYSGSKAGVVMFTRSLAPYKRQGIRVNVLCPEFVQTEMGEKLGHRFISLMGGFVPMEMVVKGALELIMDKSRAGSCLWITNRRGMEYW 254

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.506e-8
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = -1

Query:  116 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTP-YKREGIRVNVLCPEVVRTEMGEKLDPKYVSLM 397
            +++NLV  I   ++A+K M   Q+ G I+N GS  G        IY  SK G++ F++SL     +  IRVNV+ P  +RT+M   L    ++ M
Sbjct:  103 LSINLVGTIQTCKVALKGM-IQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSDLKEDSLNKM 196

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: DCXR_BOVIN (L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.809e-8
Identity = 42/128 (32.81%), Postives = 61/128 (47.66%), Query Frame = -1

Query:   53 TINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTR----SLTPYKREGIRVNVLCPEVVRTEMGEKL--DPKYVSLM------GGFVPMELVVKGAFELITDES 400
            + +VNL AVI  +++  + + A   PGVI+N  S A         +Y  +KG +   T+     L P+K   IRVN + P VV T MG+    DP+    M      G F  +E VV     L++D S
Sbjct:  103 SFSVNLRAVIQVSQIVARGLIARGAPGVIVNVSSQASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHK---IRVNAVNPTVVMTPMGQAAWSDPQKAKAMLDRIPLGRFAEVENVVDTILFLLSDRS 227

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.159e-8
Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = -1

Query:  116 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTP-YKREGIRVNVLCPEVVRTEMGEKLDPKYVSLM 397
            ++VNLV  I   +LA+++M   Q+ G I+N GS  G        IY  SK G++ F++SL     +  IRVNV+ P  + T+M   L+   ++ M
Sbjct:  103 LSVNLVGTIQTCKLALRSM-IQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTLGLEEDSLTKM 196

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 3.166e-8
Identity = 36/106 (33.96%), Postives = 54/106 (50.94%), Query Frame = -1

Query:   98 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREG----IRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPM 403
              I +NL  V  CT+ A+K M   +K G IIN  S  GL        Y+ +KGGV+ F+++     REG    I VNV+CP  + ++M  +L       + G +P+
Sbjct:  180 EVIALNLTGVFLCTQAAVKIMMK-KKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAA---REGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPL 281

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: ADH1_CERCO (Alcohol dehydrogenase 1 OS=Ceratitis cosyra GN=ADH1 PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 6.227e-8
Identity = 49/152 (32.24%), Postives = 68/152 (44.74%), Query Frame = -1

Query:    2 TINVNLVAVIDCTRLAIKTMQALQKP--GVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTP---YKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMEL--------VVKGAFELITDESRAGSCLWISNR------RGMVYW 400
            T+N+NL+ +I+ T  AI  M   +K   GVI+N  S  GL P     IY  SK GV+ F+RSL     Y+  GI V   CP +  T +   +  KY       +  +L         V GA      E R    ++ISN+      +  VYW
Sbjct:  102 TMNINLIGLINTTLEAIPLMDKNKKGRGGVIVNIASVLGLEPGPPAAIYCASKFGVMGFSRSLGDPHYYEHTGIAVVTFCPGLTDTPLKNNVATKYTFDYSKEIGEKLNHSKTQKPEVCGAHLAQVIELRDNGAIYISNQGTLTKVKPSVYW 253

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2QYC9_GOSRA	5.507e-89	100.00	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2M531_GOSRA	7.298e-89	100.00	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2Q649_GOSRA	8.121e-89	100.00	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0NUU6_GOSAR	9.544e-89	100.00	Zinc-binding alcohol dehydrogenase domain-containi...	[more]
A0A0D2NGC0_GOSRA	1.156e-88	100.00	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2PYU1_GOSRA	1.554e-74	84.33	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2NGC6_GOSRA	2.267e-74	84.33	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061DZW3_THECC	8.113e-74	81.34	ARP protein (REF) isoform 3 OS=Theobroma cacao GN=...	[more]
A0A061DZP5_THECC	1.727e-72	81.34	ARP protein (REF) isoform 2 OS=Theobroma cacao GN=...	[more]
A0A061E7L3_THECC	2.131e-72	81.34	ARP protein (REF) isoform 1 OS=Theobroma cacao GN=...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
CBR4_XENLA	2.506e-8	34.74	Carbonyl reductase family member 4 OS=Xenopus laev...	[more]
DCXR_BOVIN	2.809e-8	32.81	L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV...	[more]
CBR4_XENTR	3.159e-8	34.74	Carbonyl reductase family member 4 OS=Xenopus trop...	[more]
FABG_ARATH	3.166e-8	33.96	3-oxoacyl-[acyl-carrier-protein] reductase, chloro...	[more]
ADH1_CERCO	6.227e-8	32.24	Alcohol dehydrogenase 1 OS=Ceratitis cosyra GN=ADH...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 62..79 score: 38.32 coord: 42..61 score: 30.79 coord: 16..32 score: 32.46
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 2..85 e-value: 2.1E-17 score: 63.1
IPR016040	NAD(P)-binding domain	GENE3D	3.40.50.720		coord: 3..122 e-value: 1.0E-21 score: 76.8
IPR016040	NAD(P)-binding domain	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 3..120

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0001749 ID=g.arboreum_cottongen_reftransV1_0001749; Name=g.arboreum_cottongen_reftransV1_0001749; organism=Gossypium arboreum; type=contig; length=403bp
GCCAATATACCATGCCTCTGCGGTTTGAAATCCATAGGCAAGAACCAGCT
CTGCTTTCATCAGTGATAAGCTCGAAAGCACCTTTTACCACCAACTCCAT
TGGCACAAAGCCTCCCATTAGAGATACATATTTGGGGTCCAGTTTTTCTC
CCATCTCTGTTCGAACAACCTCAGGGCAAAGAACATTGACACGTATTCCT
TCACGTTTGTACGGAGTTAGTGATCTAGTAAACAAGACAACACCTCCTTT
TGAGCCAGAGTAAATGGGGTCCAAGAAAAATGGGAAAAGACCAGCATAAG
ATCCTGTATTGATTATCACCCCTGGCTTTTGCAGAGCTTGCATAGTTTTA
ATTGCAAGGCGAGTACAATCAATAACTGCAACCAGGTTGACATTAATGGT
GTG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom

Search form

g.arboreum_cottongen_reftransV1_0001749, g.arboreum_cottongen_reftransV1_0001749 (contig) Gossypium arboreum

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