g.arboreum_cottongen_reftransV1_0001749, g.arboreum_cottongen_reftransV1_0001749 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001749
Unique Nameg.arboreum_cottongen_reftransV1_0001749
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length403
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr7chromosomeg.arboreum_cottongen_reftransV1_0001749:1..403 .
Chr7:38851917..38853944 -
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2QYC9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 5.507e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2M531_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 7.298e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2Q649_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 8.121e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0B0NUU6_GOSAR (Zinc-binding alcohol dehydrogenase domain-containing 2 OS=Gossypium arboreum GN=F383_01891 PE=4 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 9.544e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2NGC0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007700 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.156e-88
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2PYU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007800 PE=4 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.554e-74
Identity = 113/134 (84.33%), Postives = 123/134 (91.79%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQA QKPGVIIN  S AGL+P FL P+YS SKGGV++FTRSLTPYKR+GIRVNVLCPE VRTEM EK+DPK +SLMGGFVPME+VVKGAFELITDESRAGSCLWI+NRRG+ YW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQAQQKPGVIINVASSAGLYPLFLGPVYSASKGGVIMFTRSLTPYKRQGIRVNVLCPEFVRTEMVEKMDPKLISLMGGFVPMEMVVKGAFELITDESRAGSCLWITNRRGLEYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A0D2NGC6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G007800 PE=4 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.267e-74
Identity = 113/134 (84.33%), Postives = 123/134 (91.79%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNLVAVIDCTRLAIKTMQA QKPGVIIN  S AGL+P FL P+YS SKGGV++FTRSLTPYKR+GIRVNVLCPE VRTEM EK+DPK +SLMGGFVPME+VVKGAFELITDESRAGSCLWI+NRRG+ YW
Sbjct:  121 HTINVNLVAVIDCTRLAIKTMQAQQKPGVIINVASSAGLYPLFLGPVYSASKGGVIMFTRSLTPYKRQGIRVNVLCPEFVRTEMVEKMDPKLISLMGGFVPMEMVVKGAFELITDESRAGSCLWITNRRGLEYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A061DZW3_THECC (ARP protein (REF) isoform 3 OS=Theobroma cacao GN=TCM_007040 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.113e-74
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNL+AV+DCTRLAIKTMQALQKPGVIIN GS AGL+P ++DPIYSGSK GVV+FTRSL PYKR+GIRVNVLCPE V+TEMGEKL  +++SLMGGFVPME+VVKGA ELI D+SRAGSCLWI+NRRGM YW
Sbjct:  121 HTINVNLIAVVDCTRLAIKTMQALQKPGVIINLGSAAGLYPAYVDPIYSGSKAGVVMFTRSLAPYKRQGIRVNVLCPEFVQTEMGEKLGHRFISLMGGFVPMEMVVKGALELIMDKSRAGSCLWITNRRGMEYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A061DZP5_THECC (ARP protein (REF) isoform 2 OS=Theobroma cacao GN=TCM_007040 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.727e-72
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNL+AV+DCTRLAIKTMQALQKPGVIIN GS AGL+P ++DPIYSGSK GVV+FTRSL PYKR+GIRVNVLCPE V+TEMGEKL  +++SLMGGFVPME+VVKGA ELI D+SRAGSCLWI+NRRGM YW
Sbjct:  121 HTINVNLIAVVDCTRLAIKTMQALQKPGVIINLGSAAGLYPAYVDPIYSGSKAGVVMFTRSLAPYKRQGIRVNVLCPEFVQTEMGEKLGHRFISLMGGFVPMEMVVKGALELIMDKSRAGSCLWITNRRGMEYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Match: A0A061E7L3_THECC (ARP protein (REF) isoform 1 OS=Theobroma cacao GN=TCM_007040 PE=4 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.131e-72
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = -1 
Query:    2 HTINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLWISNRRGMVYW 403
            HTINVNL+AV+DCTRLAIKTMQALQKPGVIIN GS AGL+P ++DPIYSGSK GVV+FTRSL PYKR+GIRVNVLCPE V+TEMGEKL  +++SLMGGFVPME+VVKGA ELI D+SRAGSCLWI+NRRGM YW
Sbjct:  121 HTINVNLIAVVDCTRLAIKTMQALQKPGVIINLGSAAGLYPAYVDPIYSGSKAGVVMFTRSLAPYKRQGIRVNVLCPEFVQTEMGEKLGHRFISLMGGFVPMEMVVKGALELIMDKSRAGSCLWITNRRGMEYW 254
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: PGDH_RAT (15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Rattus norvegicus GN=Hpgd PE=2 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.119e-9
Identity = 46/152 (30.26%), Postives = 75/152 (49.34%), Query Frame = -1 
Query:    5 HTINVNLVAVIDCTRLAIKTM--QALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRS---LTPYKREGIRVNVLCPEVVRTEMGEKLDP-----KYVSLMG---------GFVPMELVVKGAFELITDESRAGSCLWISNRRGMVY 403
             T+ +NLV+VI  T L +  M  Q   + G+IIN  S AGL P    P+Y  SK G++ FTRS        + G+R+NV+CP  V+T + E ++      +Y+             G +    +  G   LI D++  G+ + I+  +G+ +
Sbjct:  102 QTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINISSIAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVKTPILESIEKEENMGQYIEYTDQIKAMMKFYGILDPSAIANGLINLIEDDALNGAIMKITASKGIHF 253
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: CBR4_HUMAN (Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3)

HSP 1 Score: 57.3806 bits (137), Expect = 1.425e-9
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = -1 
Query:  125 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTP-YKREGIRVNVLCPEVVRTEMGEKLDPKYV 397
            ++ NL+  +   + A++TM   Q+ G I+N GS  GL       +YS SKGG+V F+R+L     R+ IRVNV+ P  V T+M + L  +++
Sbjct:  104 LHTNLLGSMLTCKAAMRTM-IQQQGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDMTKDLKEEHL 194
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: DHB3_MOUSE (Testosterone 17-beta-dehydrogenase 3 OS=Mus musculus GN=Hsd17b3 PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.613e-9
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = -1 
Query:   92 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLT-PYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMEL 397
            I+ N+ +V+  T+L +K M++ +K G+I+N  S A L P+ L  +YS SK  V  F+++L+  Y+ +GI + VL P  + T M + L+ K       FV   L
Sbjct:  150 IHCNITSVVKMTQLVLKHMESRRK-GLILNISSGAALRPWPLYSLYSASKAFVYTFSKALSVEYRDKGIIIQVLTPYSISTPMTKYLNNKMTKTADEFVKESL 251
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.642e-9
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = -1 
Query:  125 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLTP-YKREGIRVNVLCPEVVRTEMGEKLDPKYV 397
            ++ NL+  +   R A+KTM   Q+ G I+N GS  GL       +YS SKGG+V F+R+L     ++ IRVNV+ P  + T+M + L+ + +
Sbjct:  104 LHTNLLGSMLTCRAALKTMIK-QQRGSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDMTKDLNEELL 194
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: DHB3_HUMAN (Testosterone 17-beta-dehydrogenase 3 OS=Homo sapiens GN=HSD17B3 PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 5.762e-9
Identity = 33/93 (35.48%), Postives = 55/93 (59.14%), Query Frame = -1 
Query:  122 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLT-PYKREGIRVNVLCPEVVRTEMGEKLDPKYVS 397
            I+ N+ +V+  T+L +K M++ QK G+I+N  S   LFP+ L  +YS SK  V  F+++L   YK + + + VL P  V T M + L+   ++
Sbjct:  154 IHCNITSVVKMTQLILKHMESRQK-GLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQVLTPYAVSTAMTKYLNTNVIT 245
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: DCXR_MESAU (L-xylulose reductase OS=Mesocricetus auratus GN=DCXR PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 5.861e-9
Identity = 42/128 (32.81%), Postives = 59/128 (46.09%), Query Frame = -1 
Query:   53 TINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTR----SLTPYKREGIRVNVLCPEVVRTEMGEK--LDPKYVSLM------GGFVPMELVVKGAFELITDES 400
            + NVNL AVI  +++  + M A   PG I+N  S A         +Y  +KG + + T+     L P+K   IRVN + P VV T MG     DP    +M      G F  +E VV     L++  S
Sbjct:  103 SFNVNLRAVIQVSQIVARGMIARGAPGAIVNVSSQASQRALANHSVYCSTKGALDMLTKMMALELGPHK---IRVNAVNPTVVMTSMGRTNWSDPHKAKVMLDRIPLGKFAEVENVVDAILFLLSHRS 227
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: DHB12_ANAPL (Very-long-chain 3-oxoacyl-CoA reductase OS=Anas platyrhynchos GN=HSD17B12 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 6.918e-9
Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = -1 
Query:   35 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSL-TPYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPM-ELVVKGAFELITDESRAGSCL 397
            IN+N+++V   TRL +  M    K GVI+N  S AG++P  L  +YS SK  V  F+R L   YK +GI V  + P  V T+M +   P +        P  E  V+ A   +  +S+   CL
Sbjct:  157 ININIMSVCKMTRLVLPGMLERSK-GVILNISSAAGMYPTPLLTLYSASKAFVDYFSRGLHAEYKSKGIIVQSVMPYYVATKMSKISKPSFDK------PTPETYVRAAIGTVGLQSQTNGCL 272
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: DCXR_CAVPO (L-xylulose reductase OS=Cavia porcellus GN=DCXR PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.406e-8
Identity = 46/137 (33.58%), Postives = 65/137 (47.45%), Query Frame = -1 
Query:   11 TINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTR----SLTPYKREGIRVNVLCPEVVRTEMGEK--LDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLW-ISNRRGM 400
            + NVNL AVI  +++  K M A   PG I+N  S A         +Y  +KG + + T+     L P+K   IRVN + P VV T MG     DP     M   +P+     G F  +  E+   + L+ +SNR GM
Sbjct:  103 SFNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALYMLTKMMALELGPHK---IRVNAVNPTVVMTPMGRTNWSDPHKAKAMLDRIPL-----GKFAEV--ENVVDTILFLLSNRSGM 229
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: DCXR_MOUSE (L-xylulose reductase OS=Mus musculus GN=Dcxr PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 1.702e-8
Identity = 46/137 (33.58%), Postives = 65/137 (47.45%), Query Frame = -1 
Query:   11 TINVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTR----SLTPYKREGIRVNVLCPEVVRTEMGEK--LDPKYVSLMGGFVPMELVVKGAFELITDESRAGSCLW-ISNRRGM 400
            + NVNL AVI  +++  K M A   PG I+N  S A         +Y  +KG + + T+     L P+K   IRVN + P VV T MG     DP     M   +P+     G F  +  E+   + L+ +SNR GM
Sbjct:  103 SFNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALDMLTKMMALELGPHK---IRVNAVNPTVVMTPMGRTNWSDPHKAKAMLDRIPL-----GKFAEV--ENVVDTILFLLSNRSGM 229
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=fabG PE=3 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 2.100e-8
Identity = 40/140 (28.57%), Postives = 66/140 (47.14%), Query Frame = -1 
Query:    5 INVNLVAVIDCTRLAIKTMQALQKPGVIINTGSYAGLFPFFLDPIYSGSKGGVVLFTRSLT-PYKREGIRVNVLCPEVVRTEMGEKLDPKYVSLMGGFVPMELV-----VKGAFELITDESR---AGSCLWISNRRGMVY 397
            IN NL     C + A +TMQ  ++ G II  GS +G++       Y+ +K G++   RS++    + G+  NV+ P  + TEM   LD +  +    F+P + V     V GA   +  E     AG+ + +    GM +
Sbjct:  117 INTNLTGAFRCAQRASRTMQ-RKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRALDERIQAGALDFIPAKRVGTAEEVAGAVSFLASEDASYIAGAVIPVDGGMGMGH 255
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2QYC9_GOSRA5.507e-89100.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2M531_GOSRA7.298e-89100.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2Q649_GOSRA8.121e-89100.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0NUU6_GOSAR9.544e-89100.00Zinc-binding alcohol dehydrogenase domain-containi... [more]
A0A0D2NGC0_GOSRA1.156e-88100.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2PYU1_GOSRA1.554e-7484.33Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2NGC6_GOSRA2.267e-7484.33Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061DZW3_THECC8.113e-7481.34ARP protein (REF) isoform 3 OS=Theobroma cacao GN=... [more]
A0A061DZP5_THECC1.727e-7281.34ARP protein (REF) isoform 2 OS=Theobroma cacao GN=... [more]
A0A061E7L3_THECC2.131e-7281.34ARP protein (REF) isoform 1 OS=Theobroma cacao GN=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001749 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PGDH_RAT1.119e-930.2615-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=... [more]
CBR4_HUMAN1.425e-936.96Carbonyl reductase family member 4 OS=Homo sapiens... [more]
DHB3_MOUSE1.613e-934.95Testosterone 17-beta-dehydrogenase 3 OS=Mus muscul... [more]
CBR4_BOVIN1.642e-936.96Carbonyl reductase family member 4 OS=Bos taurus G... [more]
DHB3_HUMAN5.762e-935.48Testosterone 17-beta-dehydrogenase 3 OS=Homo sapie... [more]
DCXR_MESAU5.861e-932.81L-xylulose reductase OS=Mesocricetus auratus GN=DC... [more]
DHB12_ANAPL6.918e-934.96Very-long-chain 3-oxoacyl-CoA reductase OS=Anas pl... [more]
DCXR_CAVPO1.406e-833.58L-xylulose reductase OS=Cavia porcellus GN=DCXR PE... [more]
DCXR_MOUSE1.702e-833.58L-xylulose reductase OS=Mus musculus GN=Dcxr PE=2 ... [more]
FABG_MYCS22.100e-828.573-oxoacyl-[acyl-carrier-protein] reductase FabG OS... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 62..79
score: 38.32
coord: 42..61
score: 30.79
coord: 16..32
score: 32.46
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 2..85
e-value: 2.1E-17
score: 63.1
IPR016040NAD(P)-binding domainGENE3D3.40.50.720coord: 3..122
e-value: 1.0E-21
score: 76.8
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 3..120

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001749 ID=g.arboreum_cottongen_reftransV1_0001749; Name=g.arboreum_cottongen_reftransV1_0001749; organism=Gossypium arboreum; type=contig; length=403bp
GCCAATATACCATGCCTCTGCGGTTTGAAATCCATAGGCAAGAACCAGCT
CTGCTTTCATCAGTGATAAGCTCGAAAGCACCTTTTACCACCAACTCCAT
TGGCACAAAGCCTCCCATTAGAGATACATATTTGGGGTCCAGTTTTTCTC
CCATCTCTGTTCGAACAACCTCAGGGCAAAGAACATTGACACGTATTCCT
TCACGTTTGTACGGAGTTAGTGATCTAGTAAACAAGACAACACCTCCTTT
TGAGCCAGAGTAAATGGGGTCCAAGAAAAATGGGAAAAGACCAGCATAAG
ATCCTGTATTGATTATCACCCCTGGCTTTTGCAGAGCTTGCATAGTTTTA
ATTGCAAGGCGAGTACAATCAATAACTGCAACCAGGTTGACATTAATGGT
GTG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom